DC887266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_METST (50S ribosomal protein L37Ae OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-12 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = -3 Query: 214 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL 462 + K G G++G RYG ++ +K +E H+K+ C C + VKR GIW C+ CG V GGAY T + I+R+ Sbjct: 3 KKSKVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCGAVFTGGAYIPTTPMGKVAKRNIKRI 85
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_THEVO (50S ribosomal protein L37Ae OS=Thermoplasma volcanium GN=rpl37ae PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.063e-11 Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = -3 Query: 265 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 471 M+KRT K G G++G RYG ++RK+ ++ + + Y C C K VKR A GIW C+ CG AGGAY Sbjct: 1 MSKRTLKVGAAGRFGPRYGVTIRKEWNEIYKQKIALYTCPSCKKKRVKRLAAGIWVCRHCGYKFAGGAY 69
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_AERPE (50S ribosomal protein L37Ae OS=Aeropyrum pernix GN=rpl37ae PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.063e-11 Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = -3 Query: 262 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKY-AVKRKAVGIWGCKDCGKVKAGGAYT 462 RTK G G+YG RYG S+RK+++ + ++ + C FCG V+R +VG+W C+ CG AG AYT Sbjct: 3 RTKVVGPAGRYGPRYGVSVRKRVRDILARRYQPHECPFCGSTGTVRRVSVGVWSCRKCGNTWAGAAYT 70
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_NANEQ (50S ribosomal protein L37Ae OS=Nanoarchaeum equitans GN=rpl37ae PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.388e-11 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = -3 Query: 265 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 459 TKK G G++G RYG +RK++ +E+ Q K+ C FC AV R+A GI+ CK CGK G AY Sbjct: 6 TKKVGPTGRFGPRYGLGIRKRVLTVEIKQRKKHVCPFCRSKAVIREAYGIYRCKKCGKQFTGLAY 70
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_HALSA (50S ribosomal protein L37Ae OS=Halobacterium salinarium GN=rpl37ae PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 8.996e-11 Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = -3 Query: 202 GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT 447 G G++G RYG R+++ +E + + + C CG AV R+ GIW C CG AGGAY T S TV +IR +T Sbjct: 8 GSAGRFGARYGRVSRRRVSDIEGTMNEDHACPDCGSEAVSREGTGIWQCGKCGYKYAGGAYQPQTPSGKTVTRSIRTALGET 89
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_HALS3 (50S ribosomal protein L37Ae OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.996e-11 Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = -3 Query: 202 GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT 447 G G++G RYG R+++ +E + + + C CG AV R+ GIW C CG AGGAY T S TV +IR +T Sbjct: 8 GSAGRFGARYGRVSRRRVSDIEGTMNEDHACPDCGSEAVSREGTGIWQCGKCGYKYAGGAYQPQTPSGKTVTRSIRTALGET 89 The following BLAST results are available for this feature:
BLAST of DC887266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887266 ID=DC887266; Name=DC887266; organism=Citrus sinensis; type=EST; length=554bpback to top |