FC921892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.452e-14 Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = -2 Query: 20 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISY 274 A+ELV NP ++F DEPTSGLD+ + V+ ++ GR+++CTIHQPS +FE FD+L+++ + GQ +Y G + C+L+ Y Sbjct: 228 ALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIICTIHQPSAKLFELFDQLYVLSQ-GQCVYRGKV----CNLVPY 307
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: PDR11_YEAST (ATP-dependent permease PDR11 OS=Saccharomyces cerevisiae GN=PDR11 PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 3.234e-14 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = -2 Query: 50 VELVANPSII-FMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 271 VELV PS++ F+DEPTSGLD AA +++ ++ G+ ++CTIHQPS + FD ++L+KRGG+ +Y G L Sbjct: 889 VELVTKPSLLLFLDEPTSGLDAEAALTIVQFLKKLSMQGQAILCTIHQPSKSVISYFDNIYLLKRGGECVYFGSL 963
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.234e-14 Identity = 37/74 (50.00%), Postives = 54/74 (72.97%), Query Frame = -2 Query: 56 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 274 A+E++ P I+F+DEPTSGLD+ +A V++ +RN D GRTVV +IHQPS ++F FD+LFL+ G+ +Y G Sbjct: 179 ALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGGRTVVSSIHQPSSEVFALFDDLFLLS-SGETVYFG 251
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.234e-14 Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = -2 Query: 56 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 274 A+E++ P ++F+DEPTSGLD+ +A V +T+R GRTV+ +IHQPS ++FE FD L+L+ GG+ +Y G Sbjct: 204 ALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYLLS-GGKTVYFG 275
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.224e-14 Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = -2 Query: 8 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 274 A+ELV NP ++F DEPTSGLD+ + V+ +++ GRT++CTIHQPS +FE FD+L+++ + GQ I+ G + +LI Y + + Sbjct: 212 ALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYILSQ-GQCIFKGVV----TNLIPYLKGL 295
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB7G_ARATH (ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.204e-14 Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = -2 Query: 17 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYF 274 A EL+A+PS+IF DEPT+GLD A VM T++ G TV+C+IHQP ++ FD++ L+ G +Y GP G+ ++YF Sbjct: 227 ACELIASPSVIFADEPTTGLDAFQAEKVMETLQKLAQDGHTVICSIHQPRGSVYAKFDDIVLLTE-GTLVYAGPAGKEP---LTYF 308
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.409e-14 Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = -2 Query: 56 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 274 A+ELV NP ++F DEPTSGLD+ + V+ ++ GR++VCTIHQPS +FE FD+L+++ + GQ +Y G Sbjct: 228 ALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQ-GQCVYRG 299
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.096e-13 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = -2 Query: 11 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEA 274 ++EL+ PS+I +DEPTSGLD + VM ++ +GRT++CTIHQP +I++ FD L L+ G IY G + + YF A Sbjct: 275 SIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAKSGRTIICTIHQPRSNIYDMFDNLLLL-GDGNTIYYGKANK----ALEYFNA 357
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.575e-13 Identity = 38/86 (44.19%), Postives = 59/86 (68.60%), Query Frame = -2 Query: 8 LVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 265 LV NPS+IF+DEPTSGLD+ AA +M+T+ N G TV+C+IHQP +IF F+++ ++ + G+ IY G +++ YFE++ Sbjct: 215 LVTNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLKGVTVICSIHQPRPEIFALFNKVMVIIK-GKMIYSG------SNILEYFESL 293
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.670e-13 Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = -2 Query: 8 ELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 268 E++ NPS++ +DEPTSGLD+ AA ++ T+R+ GRTVV TIHQPS ++ FD++ ++ G IY G GR ++ YF +I Sbjct: 235 EMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVVTTIHQPSSRLYRMFDKVLVLSE-GCPIYSGDSGR----VMEYFGSI 316 The following BLAST results are available for this feature:
BLAST of FC921892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921892 ID=FC921892; Name=FC921892; organism=Citrus sinensis; type=EST; length=278bpback to top |