FC921892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG8_DICDI (ABC transporter G family member 8 OS=Dictyostelium discoideum GN=abcG8 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.040e-12 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = -2 Query: 8 LVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 265 L+ NPS+IF+DEPTSGLD+ AA +M+T+ N G TV+C+IHQP +IF+ +++ ++ + G+ IY G +++ YFE++ Sbjct: 214 LITNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLKGVTVICSIHQPRPEIFQLINKVMVIIK-GKMIYSG------SNILEYFESL 292
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB24G_ARATH (ABC transporter G family member 24 OS=Arabidopsis thaliana GN=ABCG24 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.027e-12 Identity = 28/76 (36.84%), Postives = 52/76 (68.42%), Query Frame = -2 Query: 44 VELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 271 +E+V PS++F+DEPTSGLD+ ++ +++R +R+ G + +HQPS +F+ F++L L+ +GG +Y G + + Sbjct: 630 LEMVMEPSVLFLDEPTSGLDSASSQLLLRALRHEALEGVNICMVVHQPSYTLFKTFNDLVLLAKGGLTVYHGSVNK 705
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.163e-12 Identity = 35/87 (40.23%), Postives = 53/87 (60.92%), Query Frame = -2 Query: 8 ELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 268 E++ NPS++ +DEPTSGLD+ A + + + + G+TV+ TIHQPS +F FD+L L+ RG +Y G S + YF +I Sbjct: 316 EIIINPSLLLLDEPTSGLDSTTALRTILMLHDIAEAGKTVITTIHQPSSRLFHRFDKLILLGRGSL-LYFG----KSSEALDYFSSI 397
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.163e-12 Identity = 35/87 (40.23%), Postives = 53/87 (60.92%), Query Frame = -2 Query: 8 ELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 268 E++ NPS++ +DEPTSGLD+ A ++ T++ GRTVV TIHQPS I+ FD++ L+ G IY G + + YF ++ Sbjct: 217 EMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLASGGRTVVTTIHQPSSRIYHMFDKVVLLSE-GSPIYYGA----ASSAVEYFSSL 298
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB28G_ARATH (ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.743e-12 Identity = 29/74 (39.19%), Postives = 48/74 (64.86%), Query Frame = -2 Query: 50 VELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 271 +E+V PS++ +DEPTSGLD+ ++ +++R +R G + +HQPS +F FD+L L+ +GG Y GP+ Sbjct: 652 LEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVVHQPSYTLFRMFDDLILLAKGGLICYQGPV 725
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: PDR1_SCHPO (ATP-binding cassette transporter pdr1 OS=Schizosaccharomyces pombe GN=pdr1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.807e-12 Identity = 33/92 (35.87%), Postives = 58/92 (63.04%), Query Frame = -2 Query: 2 AVELVANP-SIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPG 274 AVEL A P SI+ +DEP +GLD+++A +++ ++ +G +++C++ QPS I E FD + ++ G +Y +GR L++YF+ I G Sbjct: 910 AVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLARSGLSILCSVSQPSSRILELFDMMLILDLNGNTVYYDTMGRDLSKLVNYFKRIHG 1001
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG7_DICDI (ABC transporter G family member 7 OS=Dictyostelium discoideum GN=abcG7 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.807e-12 Identity = 37/88 (42.05%), Postives = 58/88 (65.91%), Query Frame = -2 Query: 5 LVANPSIIFMDEPTSGLDTRAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIP 265 LV NPS++F+DEPTSGLD+ A VM+ + N TV G TV+C+IHQP +I+ F+++ +M + G+ IY G +++Y ++P Sbjct: 398 LVTNPSLLFLDEPTSGLDSLNALKVMKVLMNLTVIKGVTVICSIHQPRPEIYHLFNKIMIMLK-GRMIYCGN------DVLNYLSSLP 478
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.150e-11 Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = -2 Query: 8 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 274 A+EL+ +PSI+F+DEPT+GLD+ A V+ ++ GRT++ +IHQP IF+ FD L L+ G+ ++ GP + + YF AI Sbjct: 196 AMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP----AQEALGYFGAI 279
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.502e-11 Identity = 30/71 (42.25%), Postives = 46/71 (64.79%), Query Frame = -2 Query: 62 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 274 A E++ +PS++ +DEPTSGLD+ +A ++ ++ GRTV+ TIHQPS +F FD+L L+ G Y Sbjct: 248 AYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAKAGRTVITTIHQPSSRMFHMFDKLLLISEGHPAFY 318
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.962e-11 Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = -2 Query: 8 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 274 A+EL+ +PSI+F+DEPT+GLD+ A V+ ++ GRT++ +IHQP IF+ FD L L+ G+ ++ GP + + YF +I Sbjct: 197 AMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP----AREALGYFASI 280 The following BLAST results are available for this feature:
BLAST of FC921892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921892 ID=FC921892; Name=FC921892; organism=Citrus sinensis; type=EST; length=278bpback to top |