FC921892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.455e-11 Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = -2 Query: 53 VELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 271 +EL+ +PSI+F+DEPT+GLD+ A V+ ++ GRT++ +IHQP IF+ FD L L+ G+ ++ GP Sbjct: 197 MELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGKLMFHGP 268
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.455e-11 Identity = 33/87 (37.93%), Postives = 53/87 (60.92%), Query Frame = -2 Query: 8 ELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 268 E++ NPS++ +DEPTS LD+ A +++ + G+T+V TIHQPS +F FD+L ++ RG +Y G + +SYF +I Sbjct: 304 EIMTNPSLLLLDEPTSSLDSTTALKIVQMLHCIAKAGKTIVTTIHQPSSRLFHRFDKLVVLSRGSL-LYFG----KASEAMSYFSSI 385
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.737e-11 Identity = 25/72 (34.72%), Postives = 48/72 (66.67%), Query Frame = -2 Query: 56 VELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 271 VE+V PS++ +DEPT+GLD+ ++ +++R +R G + +HQPS +++ FD++ ++ +GG +Y G Sbjct: 618 VEMVMEPSLLILDEPTTGLDSASSQLLLRALRREALEGVNICMVVHQPSYTMYKMFDDMIILAKGGLTVYHG 689
BLAST of FC921892 vs. ExPASy Swiss-Prot
Match: AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.737e-11 Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = -2 Query: 8 AVELVANPSIIFMDEPTSGLDTRAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAI 274 A EL+ NPS++ +DEPTSGLD AA +++T+ G+TVV +IHQPS +F+ FD + L+ G+ ++VG GR + ++YFE++ Sbjct: 218 AHELLINPSLLVLDEPTSGLDATAALRLVQTLAGLAHGKGKTVVTSIHQPSSRVFQMFDTVLLLSE-GKCLFVGK-GRDA---MAYFESV 302 The following BLAST results are available for this feature:
BLAST of FC921892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921892 ID=FC921892; Name=FC921892; organism=Citrus sinensis; type=EST; length=278bpback to top |