CX676549

Overview
NameCX676549
Unique NameCX676549
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.380e-22
Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = -1
Query:  337 RMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISE 669
            +++ YPPCP+P+ V GL  H+D  G+ +L Q + V GLQ+ KD  W+ + P+ ++ VVN+GD +E+ITNG+Y+S+ HR    +   R SIA+FY    D  + PA +L+ E
Sbjct:  164 KVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKE 274          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22
Identity = 49/120 (40.83%), Postives = 75/120 (62.50%), Query Frame = -1
Query:  316 VMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENTPSLFR 675
            ++++NYYPPCP+P+  +G+  H+D   LT+L+  NEV GLQ+ KD  WI    +PNA V+++GD +EI++NGKY+++ HR TVN    R S   F     D  V P   L+ +  P  ++
Sbjct:  200 MLKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYK 318          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22
Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = -1
Query:  337 RMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISE 669
            +++ YPPCP+P+ V GL  H+D  G+ +L Q + V GLQ+ KD  W+ + P+ ++ VVN+GD +E+ITNG+Y+S+ HR    +   R SIA+FY    D  + PA +L+ E
Sbjct:  164 KVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKE 274          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.174e-21
Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = -1
Query:  316 ELKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENTPSLFR 774
            + + +   L+  + + + I+          G  ++ +N+YP CP P+K +G  PH D   +T+LL    V GL++     WI + P PNAFVVN G  +E++TNG  +SIEHRA  NS   R S+A F     +  + PA   +S+  P  +R
Sbjct:  155 QTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLP-GAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKENPPCYR 306          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.842e-21
Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = -1
Query:  358 SMELKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKD--RMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYP 780
            S  L SLA  L+  + + + ++ + + N   +  Q + +NYYP CPQP+  +GL  H+D   +T+LLQ ++V GLQ  +D  + WI + P+  AFVVN+GD    ++NG++++ +H+A VNS   R SIA F     D  VYP
Sbjct:  161 SERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYP 302          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.324e-21
Identity = 55/154 (35.71%), Postives = 90/154 (58.44%), Query Frame = -1
Query:  316 LKSLAMNLILKMGKVLNIKDQEMRNFF--ENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENTPSLFR 771
            L+ +A  +   +   L ++  EM      E+ + ++++NYYPPCP+P+  +G+  H+D   +T+L+  NEV   Q+ KD  W  +  +PNA +V++GD +EI++NGKY+S+ HR TVN    R S   F     + EV P  +LI+E  P  F+
Sbjct:  183 LRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVP-NEV---QVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPPKFK 332          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.324e-21
Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = -1
Query:  331 SMELKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKD--RMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENT 780
            S +L +LA  L+  + + + ++ + +     +  Q + +NYYP CPQP+  +GL  H+D   +T+LLQ ++V GLQ  +D  + WI + P+P AFVVN+GD    ++NG++++ +H+A VNS   R SIA F     D  VYP +    EN+
Sbjct:  162 SNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYPLAIREGENS 312          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.079e-20
Identity = 54/163 (33.13%), Postives = 91/163 (55.83%), Query Frame = -1
Query:  304 LKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGE------VY-PASSLISENTPSLFRRLTV 771
            +++L + L   + + L +K   +         ++  +YYP CPQPE   G + HSD   LTIL+Q +++ GLQI  +  WI +  +P A V+N+ D++++ITN K++S+EHR   N V  R S+A  +  +   +      +Y P   LISE  P +++ +TV
Sbjct:  215 VRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQ-DQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTV 376          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.409e-20
Identity = 57/160 (35.62%), Postives = 90/160 (56.25%), Query Frame = -1
Query:  316 SMELKSLAMNLILKMGKVLNIKDQEMRNFFENGM---QVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQ--IKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENTPSLFR 780
            S+E++ L M ++  + + L +K      +F+N +   Q+M  NYYPPCP P   +G   H DG  +T+L Q  ++ GLQ  I KD  WI + P+P AFVVN+G  +++ITN K+    HR   +   +R SIA      Y   + PA  L++++ P L++
Sbjct:  162 SVEVRKLTMRMLDYICEGLGLK----LGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQ--DLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELLNQDNPPLYK 315          
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.403e-20
Identity = 53/128 (41.41%), Postives = 76/128 (59.38%), Query Frame = -1
Query:  307 GMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQI-KKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYA-RYDGEVYPASSLISENTPSLFRRLT 684
            G   +R+N+YP CP+PE+ +GL  H+D   LTIL Q N   GLQ+ +++  W+ + P P   VVN+GD+  I++NGK  S+ HRA VN    R SIA  +     D ++ P S L     PSL+R +T
Sbjct:  203 GRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSN-TGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSIT 329          
The following BLAST results are available for this feature:
BLAST of CX676549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO1_ORYSI4.380e-2242.341-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
FLS_CITUN5.720e-2240.83Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
ACCO1_ORYSJ5.720e-2242.341-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
IDS3_HORVU2.174e-2133.992'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
FL3H_ARATH4.842e-2138.46Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FLS_SOLTU6.324e-2135.71Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FL3H_DIACA6.324e-2136.84Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
DV4H_CATRO1.079e-2033.13Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
HY6H_HYONI1.409e-2035.63Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
G3OX4_ARATH2.403e-2041.41Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70F04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70F04-K8-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676549 ID=CX676549; Name=CX676549; organism=Citrus sinensis; type=EST; length=780bp
TTTTTTTTTTTTTTTCAATGAAGTGGTTAAATTGCCAAAAAGCATTTGAA
TAACATTGTCAAGTACATGTGTATCACTTGCAATCTCATGATAAGCACAC
AAGAATTCAATTTCAAGAAAGACAGATACTGATCCGGTATAAGCACATAT
CATCATGAGCATGTTGTATTCTCAGTTTCTGTGCCACACTCCTTAATCCA
AAATAAACTTATAATACTAGCCTCGACCGTGTTGAATTCTCAAGACATCC
AGATAAGATTTTCCACTAAGCTCACGAGCGAGCCGGCGCCGGAGGTACTC
TTCAACTGTCAATCTTCTAAACAATGAAGGTGTATTTTCAGAGATCAAAC
TGGATGCTGGGTATACTTCACCATCGTATCTCGCGTAGTAAAATGCGGCA
ATGGAGTGTCTTTCATGTACAGAGTTTACAGTTGCACGATGCTCAATACT
ACGGTATTTTCCATTGGTTATAATCTCCATAATGTCTCCAACGTTGACGA
CGAAGGCATTTGGGAGGGGAGTAAGAGGAATCCACATTCTATCTTTCTTT
ATCTGCAGACCTTCTACTTCATTGATCTGTAGCAGAATGGTAAGACCACA
GCCATCAGAATGAGGCGTAAGACCCACAACCTTCTCCGGCTGAGGGCATG
GAGGGTAATAGTTCATCCTCATTACTTGCATTCCATTTTCAAAGAAGTTT
CTCATTTCTTGATCTTTGATATTTAAAACTTTTCCCATTTTCAATATCAG
ATTCATGGCTAGAGATTTTAACTCCATTGA
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