CX676527

Overview
NameCX676527
Unique NameCX676527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 37/80 (46.25%), Postives = 56/80 (70.00%), Query Frame = 3
Query:  459 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            N+R+ + LG++LG GQFG   +C++  +G  +ACKSIAK +L++ +D   V+ EI+IM  L+GH N+V +K  YED  YV
Sbjct:   67 NIRDLYTLGRKLGQGQFGTTYLCTELSSGIDYACKSIAKRKLISKEDVEDVRREIQIMHHLAGHKNIVSIKGAYEDPLYV 146          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15
Identity = 41/105 (39.05%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  384 PSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            P ++P     V + +  +L  ++  N+R+ + L ++LG GQFG   +C+D  TG  +ACKSI+K +L++ +D   V+ EI+IM  L+GH N+V +K  YED  YV
Sbjct:   56 PVKEPIMRRNVDNQSYYVLG-HKTPNIRDLYTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYV 159          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 3
Query:  450 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            Q   LR+ ++LG++LG GQFG   +C++K T   +ACKSI K +LV  +D   V  EI+IM  LS HPNVV +K  YED  +V
Sbjct:   18 QTPRLRDHYLLGKKLGQGQFGTTYLCTEKSTSANYACKSIPKRKLVCREDYEDVWREIQIMHHLSEHPNVVRIKGTYEDSVFV 100          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 3
Query:  471 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            ++ LG+++G G+FG+  +C+DK TGE +ACKSI+K +L T  D   V+ E+EIM  +  HPNVV LK  +ED+D V
Sbjct:   58 QYDLGREVGRGEFGITYLCTDKETGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPKHPNVVSLKDSFEDDDAV 133          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPKF_ARATH (Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 45/114 (39.47%), Postives = 59/114 (51.75%), Query Frame = 3
Query:  357 VGQSNSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            V Q         QP K    R   ETIL       +R+ + LG++LG GQFG+   C +  TG  +ACKSI K +L    D   VK EI+IM  LSG  N+V++K  YED   +
Sbjct:   65 VNQQIEKKHVLTQPLKPIVFRE-TETILG-KPFEEIRKLYTLGKELGRGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDVKREIQIMQYLSGQENIVEIKGAYEDRQSI 176          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 3
Query:  462 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            LR+ ++LG++LG GQFG   +C++K +   +ACKSI K +LV  +D   V  EI+IM  LS HPNVV +K  YED  +V
Sbjct:   21 LRDHYLLGKKLGQGQFGTTYLCTEKSSSANYACKSIPKRKLVCREDYEDVWREIQIMHHLSEHPNVVRIKGTYEDSVFV 99          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 3
Query:  459 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            ++R+ + LG +LG GQFG   +C +  TG  +ACKSI K +L++ +D   V+ EI+IM  L+G+ N+V +K  YED  YV
Sbjct:   19 SIRDLYSLGHKLGQGQFGTTYMCKEISTGREYACKSITKRKLISKEDVEDVRREIQIMHHLAGYKNIVTIKGAYEDPLYV 98          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  480 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            LG+++G G+FG+  +C+D  TGE +ACKSI+K +L T  D   V+ E+EIM  +  HPN+V LK  +ED+D V
Sbjct:   59 LGREVGRGEFGITYLCTDIKTGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPRHPNIVSLKDAFEDDDAV 131          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13
Identity = 41/116 (35.34%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  366 SNSSSEPS-----RQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            +N+S +P+     R+P       + A  +L  ++  N+R+ + L ++LG GQFG   +C++  +G  +ACKSI+K +L++ +D   V+ EI+IM  L+GH ++V +K  YED  YV
Sbjct:   57 NNNSKDPALVIPLREPIMRRNPDNQAYYVLG-HKTPNIRDIYTLSRKLGQGQFGTTYLCTEIASGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHGSIVTIKGAYEDSLYV 171          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 3
Query:  351 AAVGQSNSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            A V  + S+  P   P      +   +TIL      ++R  + LG++LG GQFGV  +C++  +G+ +ACKSI+K +LV+  D+  ++ EI+IM  LSG  N+V+ +  YED+  V
Sbjct:   45 AEVRYTPSAMNPPVVPPVVAPPKPTPDTILG-KPYDDVRSVYSLGKELGRGQFGVTYLCTEIASGKQYACKSISKRKLVSKADKEDIRREIQIMQHLSGQQNIVEFRGAYEDKSNV 159          
The following BLAST results are available for this feature:
BLAST of CX676527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CDPK5_SOLTU5.605e-1546.25Calcium-dependent protein kinase 5 OS=Solanum tube... [more]
CDPK6_ARATH7.321e-1539.05Calcium-dependent protein kinase 6 OS=Arabidopsis ... [more]
CDPKB_ARATH9.561e-1548.19Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CDPK7_ARATH2.130e-1448.68Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPKF_ARATH6.197e-1439.47Calcium-dependent protein kinase 15 OS=Arabidopsis... [more]
CDPK4_ARATH6.197e-1448.10Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPKQ_ARATH1.803e-1343.75Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPK8_ARATH1.803e-1347.95Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPK5_ARATH2.355e-1335.34Calcium-dependent protein kinase 5 OS=Arabidopsis ... [more]
CDPK2_ORYSJ3.076e-1336.21Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70D12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70D12-G24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676527 ID=CX676527; Name=CX676527; organism=Citrus sinensis; type=EST; length=699bp
AGGACAGGAGAATCATGTCTTGGGGGGCTTAATCACTGCTCCAACGGGAC
TCTCTTCTCTGTGGCTCCCTCTCTCATTCTCTCTGTCTCCCTCTAGCCGA
TCCGGTTGATCTGTTGAGAACTGAGGGAATACTCTGCCAAGAGAGTTAAG
TTTTGGTTGTTTCAGTATTCTAGGTTACTTTCCTGGCTTCTTCACGGTTT
TGCTGTTAACAATTACCCATTAATTTCCTGGCTGTTTCACGGTATTTCTG
TTGCTAACAATCAGCCACGTGGAAGTTCCATTGAATTATTAATTGAGTAA
GTGAGTTCAGGGGTATTTTTGGCTGGTCTGGGGAGCTAGAATTTGGTATG
GCGGCTGTTGGTCAGAGTAACAGCAGCAGCGAACCATCAAGACAACCTTG
TAAGTGTTACAGAGTGAGGAGCTTGGCTGAAACAATTTTGGACACGAACC
AGATCTCCAATTTGAGAGAACGATTTGTTCTTGGGCAGCAGTTGGGTTGG
GGGCAGTTTGGTGTTATAAGGGTGTGTTCTGATAAATTTACTGGAGAGGT
GTTCGCTTGTAAATCGATTGCCAAAGATAGATTGGTGACTATAGATGATG
AACGAAGTGTGAAGCTTGAGATTGAAATAATGACTAGGTTATCAGGCCAC
CCAAATGTTGTAGATCTCAAAGCGGTTTATGAGGATGAAGACTATGTAC
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