FC921886

Overview
NameFC921886
Unique NameFC921886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length239
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433F_MOUSE (14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.081e-17
Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCAS--SGDSKVFYLKMKGDYHR 234
            +GARR+SWR+ISSIEQK  + GNE  +  ++ YR KIE EL ++C+ +L LLD  LI   +    +SKVFYLKMKGDY+R
Sbjct:   53 VGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDYYR 132          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.081e-17
Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCAS--SGDSKVFYLKMKGDYHR 234
            +GARR+SWR+ISSIEQK  + GNE  +  ++ YR KIE EL ++C+ +L LLD  LI   +    +SKVFYLKMKGDY+R
Sbjct:   53 VGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDYYR 132          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433B_RAT (14-3-3 protein beta/alpha OS=Rattus norvegicus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 1.412e-17
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            +GARR+SWR+ISSIEQK E   NE      ++YR KIE EL  IC  +L+LLD  LI  A+  +SKVFYLKMKGDY R
Sbjct:   54 VGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICSDVLELLDKYLILNATHAESKVFYLKMKGDYFR 129          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.461e-14
Identity = 38/78 (48.72%), Postives = 57/78 (73.08%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRI+ S+EQK  + G++  V TI  Y+ K+E EL ++C+ +L ++    +P A+SG++ VF+ KMKGDY+R
Sbjct:   53 IGARRASWRILESLEQKVTA-GDQPGV-TINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYR 128          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.472e-14
Identity = 36/78 (46.15%), Postives = 55/78 (70.51%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            +GARR++WR+I   E K  +   +  ++   +YR K+E EL++IC+ +L LL+  L+P AS  DSKVF+LKM+GDY+R
Sbjct:   63 VGARRSAWRVIHGSEMKAVNDRTKKQIA--EEYRIKMEKELNTICNQVLALLEDYLLPNASPDDSKVFFLKMQGDYYR 138          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 14332_ECHMU (14-3-3 protein homolog 2 OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.579e-11
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            +GARR+SWRI+SSI +K+      D       Y  K+E EL+ IC+ +L LL   LI      ++K+FY KM GDY+R
Sbjct:   65 VGARRSSWRIMSSIAKKQAGTPLADQTDI---YLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYR 139          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 14332_ECHGR (14-3-3 protein homolog 2 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.579e-11
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            +GARR+SWRI+SSI +K+      D       Y  K+E EL+ IC+ +L LL   LI      ++K+FY KM GDY+R
Sbjct:   65 VGARRSSWRIMSSIAKKQAGTPLADQTDI---YLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYR 139          
The following BLAST results are available for this feature:
BLAST of FC921886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
1433F_MOUSE1.081e-1755.0014-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 S... [more]
1433F_BOVIN1.081e-1755.0014-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=... [more]
1433B_RAT1.412e-1758.9714-3-3 protein beta/alpha OS=Rattus norvegicus GN=... [more]
14338_ORYSJ1.461e-1448.72Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
14331_SCHMA9.472e-1446.1514-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
14332_ECHMU2.579e-1143.5914-3-3 protein homolog 2 OS=Echinococcus multilocu... [more]
14332_ECHGR2.579e-1143.5914-3-3 protein homolog 2 OS=Echinococcus granulosu... [more]

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Properties
Property NameValue
Genbank descriptionC06053E08T7 RindPdigS Citrus sinensis cDNA clone C06053E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921886 ID=FC921886; Name=FC921886; organism=Citrus sinensis; type=EST; length=239bp
CCTGTGATAATCTCCCTTCATCTTCAAATAGAAAACCTTGGAGTCACCAG
AAGAAGCGCAAGGAATGAGGCGGGAGTCAAGAAGCTTCAAGATGCCGTCG
CAGATCGAGGAAAGCTCGGTCTCGATCTTGGAGCGGTAATCTCGGATCGT
GGAGACGTGGTCCTCGTTGCCGCGGCTCTCCTCTTTCTGTTCGATGGAGG
AAATAATGCGCCAACTGGCACGGCGGGCGCCGATCCCGC
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