CX676517

Overview
NameCX676517
Unique NameCX676517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.645e-20
Identity = 46/117 (39.32%), Postives = 76/117 (64.96%), Query Frame = -1
Query:  195 ELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPN 545
            E++ G+GGPG++KK  FVEG    Y  H+V+A+D     YNY+ + G G ++I  ++ + +E+K+   P+GGS   +++K++ K  A+  E++V+ G  K   +FK +EAY LANPN
Sbjct:   42 EILEGNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDI--VEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVLANPN 156          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: BEV1A_BETVE (Major pollen allergen Bet v 1-A OS=Betula verrucosa GN=BETVIA PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.512e-20
Identity = 58/142 (40.85%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L  D             VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +  E K+V TPDGGS   +  K++ K   E+K EQVK   E  + + + +E+Y LA+ +A
Sbjct:   21 KAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD----TLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20
Identity = 59/142 (41.55%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L  D             VE I G+GGPG+IKK  F EG+ +KY K RVD +D+ N  Y+++ IEG   GDA    ++ V  E K+V  PDGGS   +  KF+ K   EI  EQ+K   EK  G+ K +E+Y LA+ +A
Sbjct:   21 KAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDA----LEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDA 158          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: BEV1C_BETVE (Major pollen allergen Bet v 1-C OS=Betula verrucosa GN=BETV1C PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19
Identity = 55/140 (39.29%), Postives = 80/140 (57.14%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L+ D             VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + + +E+Y LA+ +A
Sbjct:   21 KAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDQEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: BEV1K_BETVE (Major pollen allergen Bet v 1-K OS=Betula verrucosa GN=BETV1K PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19
Identity = 55/140 (39.29%), Postives = 80/140 (57.14%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L+ D             VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + + +E+Y LA+ +A
Sbjct:   21 KAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: BEV1B_BETVE (Major pollen allergen Bet v 1-B OS=Betula verrucosa GN=BETV1B PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19
Identity = 55/140 (39.29%), Postives = 80/140 (57.14%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L+ D             VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + + +E+Y LA+ +A
Sbjct:   21 KAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: BEV1M_BETVE (Major pollen allergen Bet v 1-M/N OS=Betula verrucosa GN=BETV1M PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.988e-19
Identity = 55/140 (39.29%), Postives = 79/140 (56.43%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L  D             VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + + +E+Y LA+ +A
Sbjct:   21 KAFILDGDNLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: BEV1J_BETVE (Major pollen allergen Bet v 1-J OS=Betula verrucosa GN=BETV1J PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L  D             VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +  E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + + +E+Y LA+ +A
Sbjct:   21 KAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: BEV1F_BETVE (Major pollen allergen Bet v 1-F/I OS=Betula verrucosa GN=BETV1F PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L  D             VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +  E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + + +E+Y LA+ +A
Sbjct:   21 KAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX676517 vs. ExPASy Swiss-Prot
Match: BEV1E_BETVE (Major pollen allergen Bet v 1-E OS=Betula verrucosa GN=BETV1E PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  192 KLFVLQFDXXXXXXXXXXXXXVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVFYESKVVGTPDGGSKSPVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKVLEAYALANPNA 611
            K F+L  D             VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +  E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + + +E+Y LA+ +A
Sbjct:   21 KAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGIPFKYVKGRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
The following BLAST results are available for this feature:
BLAST of CX676517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ABR18_PEA2.645e-2039.32ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]
BEV1A_BETVE4.512e-2040.85Major pollen allergen Bet v 1-A OS=Betula verrucos... [more]
MPAG1_ALNGL7.696e-2041.55Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1C_BETVE2.239e-1939.29Major pollen allergen Bet v 1-C OS=Betula verrucos... [more]
BEV1K_BETVE2.924e-1939.29Major pollen allergen Bet v 1-K OS=Betula verrucos... [more]
BEV1B_BETVE2.924e-1939.29Major pollen allergen Bet v 1-B OS=Betula verrucos... [more]
BEV1M_BETVE4.988e-1939.29Major pollen allergen Bet v 1-M/N OS=Betula verruc... [more]
BEV1J_BETVE1.111e-1838.73Major pollen allergen Bet v 1-J OS=Betula verrucos... [more]
BEV1F_BETVE1.111e-1838.73Major pollen allergen Bet v 1-F/I OS=Betula verruc... [more]
BEV1E_BETVE1.111e-1838.73Major pollen allergen Bet v 1-E OS=Betula verrucos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70D06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70D06-G12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676517 ID=CX676517; Name=CX676517; organism=Citrus sinensis; type=EST; length=611bp
TTTTTTTTTTTTTTTTTGAAAAAGGGAAAAGCAAACTCTTTTTTTTTTTT
ATTTAACCAAAAGCCAATTATATAAATTGGCATATTTGAAAACAAAAAAA
CACGACATACGGAAGCCATAAACATGATTATTCATAATGTTGCAACAAAG
GCGACCCAAGTGCGGGGAAATGTTGACGTAAAAACTTATACGGCATTGGG
GTTTGCCAAGGCATAGGCTTCCAAAACCTTAAAAATTCCCTTCTCCTTTT
CCAAGCCTCCCTTAACCTGCTCTTCCTTAATCTCGGCACCTGGTTTGGGA
TAAAACTTGATAACAACGGGGCTCTTGCTTCCTCCGTCAGGGGTGCCCAC
AACCTTACTCTCATAAAAAACATGATCAATAGTAGGGATGTTAGCATCAC
CCTCACCTTCAATTGCCGTGTAATTGTATATCTTGTTCTCTTTGTCCAAT
GCATCAACCCTATGCTTAAAGTACTTCCAATCAGCACCTTCAACAAAGTT
AAACTTCTTGATGCTTCCAGGGCCTCCATCCCCTGAAATCAATTCAACGT
TCTTTACAACCTGAAGCAGGACTTTGGGCAGAAGGGGGTCGAACTGAAGG
ACAAAAAGTTT
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