CX676507 | Citrus Genome Database

Overview


Name	CX676507
Unique Name	CX676507
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	496

Libraries


Library Name	Type
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.797e-22
Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ D +C+K L+NC++ALP +GKV++    LPE PDST +++++  +D I L   P G+ERT+KEF ALA  AGF+G    C   NS++ME  K
Sbjct:  264 MKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.149e-21
Identity = 46/100 (46.00%), Postives = 67/100 (67.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ DE+C+K L+NCY++LP DGKV++    LPE PDS+ +++    +D I L   P G+ERT+KEF ALA  +GFKGI   C+     ++E  K
Sbjct:  262 MKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.501e-21
Identity = 45/100 (45.00%), Postives = 70/100 (70.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ D++C K+L+NCY+ALP++GKV++    LPE PD++ A+++   +D + L   P G+ERT+KEF ALA  AGFK     C+  N+++ME  K
Sbjct:  251 MKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 3.343e-21
Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            +KW+ H++ DE+C+K+L+NCY ALP+ GKV+V    LP  PD + A++     DA+ L   P G+ERT+KEF ALA+ +GF+G        N+YVMEF K
Sbjct:  267 IKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.343e-21
Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ D++C K L+NCY ALPN GKV+V    LP  PD++ A+++   +D I L   P G+ERT+KEF  LA  AGF+G    C    ++VMEF K
Sbjct:  265 MKWICHDWSDDHCAKFLKNCYDALPNIGKVIVAECVLPVYPDTSLATKNVIHIDCIMLAHNPGGKERTQKEFETLAKGAGFQGFQVMCCAFGTHVMEFLK 364

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.447e-21
Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ DE+C+  L+NCY ALP +GKV+++   LP  PD++ A++    +D I L   P G+ERT +EF +LA  AGFKG    C   N++V+EF K
Sbjct:  263 MKWICHDWSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 9.727e-21
Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ D +C+K L+ CY+ALP +GKV++    LPE PD+  A+++   +D I L   P G+ERT+KEF  LA  +GFK  N  C   NS++ME  K
Sbjct:  262 MKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGFKQFNKVCCAYNSWIMELLK 361

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 9.727e-21
Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ D +C+K L+NCY ALP +GKV+++   LP  PD++ A++    +D I L   P G+ERT+KEF  LA  AGF+G    C   N++V+EF K
Sbjct:  264 MKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 9.727e-21
Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ D +C+K L+NCY ALP +GKV+++   LP  PD++ A++    +D I L   P G+ERT+KEF  LA  AGF+G    C   N++V+EF K
Sbjct:  264 MKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363

[Close]

BLAST of CX676507 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.075e-19
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = -2

Query:  193 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 492
            MKW+ H++ D++CIK+L+NCY+ALP +GKV+++   LPE PD++ A++     D I L   P G+ERT+K+F ALA    F      C   +++VMEF K
Sbjct:  260 MKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359

The following BLAST results are available for this feature:

BLAST of CX676507 vs. ExPASy Swiss-Prot

BLAST of CX676507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27


Match Name	E-value	Identity	Description
COMT1_CATRO	8.797e-22	47.00	Caffeic acid 3-O-methyltransferase OS=Catharanthus...	[more]
OMT1_ARATH	1.149e-21	46.00	Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t...	[more]
COMT1_COFCA	1.501e-21	45.00	Caffeic acid 3-O-methyltransferase OS=Coffea canep...	[more]
IEMT_CLABR	3.343e-21	47.00	(Iso)eugenol O-methyltransferase OS=Clarkia brewer...	[more]
COMT1_EUCGU	3.343e-21	47.00	Caffeic acid 3-O-methyltransferase OS=Eucalyptus g...	[more]
COMT2_POPTM	7.447e-21	45.00	Caffeic acid 3-O-methyltransferase 2 OS=Populus tr...	[more]
COMT2_OCIBA	9.727e-21	45.00	Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas...	[more]
COMT1_POPTM	9.727e-21	45.00	Caffeic acid 3-O-methyltransferase 1 OS=Populus tr...	[more]
COMT1_POPKI	9.727e-21	45.00	Caffeic acid 3-O-methyltransferase 1 OS=Populus ki...	[more]
COMT1_CAPCH	1.075e-19	44.00	Caffeic acid 3-O-methyltransferase OS=Capsicum chi...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS08_70C11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70C11-E22-4.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX676507 ID=CX676507; Name=CX676507; organism=Citrus sinensis; type=EST; length=496bp
TTTTTTTAACACAAACAGGACTTATATTATTGAACACACAAAAGCATTAC
ATAAGAAGTTCCCGCGAGCCATAAAGGCCAAACAAAACAGAAAGTTACAG
AAAAGAAAATGGAGTATCGACACTCCAAATTAAAATTGAGAAGATGCATC
TTTCTGATAAAGAAAGAATGAAGCAATCTAGCTTCAAAGTTACTTGTAGA
ATTCCATGACATAGGAATTGCAAACGTTACATTCAAAGTTGATACCCTTA
AATCCAGCTTCGATTGCCAATGCAGTGAACTCCTTTTTGGTCCGCTCCCT
TCCATGAGGAATTTGGATTAAAAAAATTGCATCTAAAATGAAGGAATCCC
TTGAAGCCTCGGTACTGTCAGGCACTTCTGGCAACGTTGAGTTAATAACA
AGTACCTTTCCATCATTTGGAAGAGCTTTGTAACAATTCCTCAGTATCTT
TATGCAATTCTCATCATCAAAATTATGAAGCATCCACTTCATTAAA