CX676452

Overview
NameCX676452
Unique NameCX676452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_ACTP2 (Xaa-Pro dipeptidase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=pepQ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 73/224 (32.59%), Postives = 123/224 (54.91%), Query Frame = 2
Query:    8 ENSAVLHY---GHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            ++SA+LHY    +A  P  ++F      L+D GA    Y SDIT ++  +    S+ + +   + +    +I+ +  GV ++  H   ++ I E L +   +    +++    +   F+PHGLGH LG+  HD  G+   P+GT +S      SLR  R+L E MV+T+EPG YFID LL P ++N   ++  N + I  FK FGG+R E ++++ + G++N+T
Sbjct:  217 QHSAILHYTQLDYAPNPQQQSF------LIDAGATIHGYASDITRTYAADPN--SEFAAMIKQMEQYKYRIIDQLTVGVNYLSYHTQMQQWIAEMLYEYDFVRLTPEQIFEEGISRAFLPHGLGHLLGLQVHDAAGFQQNPRGTRKSPPEVYPSLRCTRDLAENMVLTIEPGFYFIDMLLNP-LQNSPLARHINWQKIAEFKQFGGIRTEDNIVMRSQGAENLT 431          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEPA (Xaa-Pro dipeptidase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=pepQ PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.933e-28
Identity = 78/224 (34.82%), Postives = 115/224 (51.34%), Query Frame = 2
Query:    8 ENSAVLHYG---HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            ENSA+LHY    + +    R+F      L+D GA Y  Y SDIT S+        D   +  A+      +I+ MKPGV + ++H      + + L    ++ G+V  ++   +  VF PHGLGH LGI  HD GG+    KGT  +       LR  REL    V+T+EPG Y ID+LL    +++  S+  N   +   + FGG+RIE +V+V  +  +NMT
Sbjct:  220 ENSAILHYTALEYTSPAQRRSF------LIDAGANYNGYASDITRSYSFEKNIFDD---LITAMDNMQLQIISMMKPGVSYAELHIQTHYKLAQILLDFDIVSGDVQGLVEQGITRVFFPHGLGHMLGIQVHDMGGFLSDEKGTHVAAPEAHPFLRCTRELDINQVLTIEPGVYIIDSLLAELKQDQRQSQ-INWNTVDVLRPFGGIRIEDNVIVHGDRIENMT 433          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_SODGM (Xaa-Pro dipeptidase OS=Sodalis glossinidius (strain morsitans) GN=pepQ PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.055e-28
Identity = 79/222 (35.59%), Postives = 120/222 (54.05%), Query Frame = 2
Query:    8 ENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVG-NVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            E++AVLHY      +  T E     L+D G EY  Y +D+T ++       SD + +  A+     A+I  ++ GV ++D H      I + LK+  ++ G + D M+   L   F+PHGLGH LG+  HD  G+    +GT  + +     LR  R LQ RMV+T+EPG YFI++LL P   N +  + FN   I  FK +GG+RIE ++++  N  +NMT
Sbjct:  221 EHAAVLHYTRL---DQHTPEHVMSFLIDAGTEYNGYAADLTRTYAAQKD--SDFAALIAAMNSEQQALIATIETGVNYIDYHLQMHGRIAKLLKQFDILSGLSEDAMVTEGLTLPFLPHGLGHPLGLQVHDVAGFMQDDRGTSLAPQSRYTHLRCTRVLQPRMVLTIEPGLYFIESLLAPWRAN-TFGRHFNWSRIESFKPYGGIRIEDNIVIHDNHIENMT 436          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_EDWI9 (Xaa-Pro dipeptidase OS=Edwardsiella ictaluri (strain 93-146) GN=pepQ PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.055e-28
Identity = 78/221 (35.29%), Postives = 121/221 (54.75%), Query Frame = 2
Query:   11 NSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAAR-LGAVFMPHGLGHFLGIDTHDPGGYPK---GTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            ++AVLHY H      R   +    L+D GAE+  Y +D+T ++  NG+  SD + +   V +A  A+I  ++ GV + D +    + +   L+   ++ G  DE   A+ L   F+PHGLGH LG+  HD  G+ +   GT+ +       LR  R ++  MV+T+EPG YFID LL P +E E   + FN   I   + +GG+RIE +V+  A+G +NMT
Sbjct:  223 HAAVLHYTHLER---RAPSEMHSFLIDAGAEFHGYAADLTRTYAANGQ--SDFAALVAEVNQAQQALIATLQTGVRYTDYNLQFHQRLAAILRHHHILTGISDEAAVAQGLTTPFLPHGLGHPLGLQVHDVAGFMQDELGTQMAAPDRYPYLRCTRIMEPGMVMTIEPGLYFIDTLLAPWLEGE-FGQHFNRGRIDALRPYGGIRIEDNVIFHAHGVENMT 437          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEHH (Xaa-Pro dipeptidase OS=Shewanella halifaxensis (strain HAW-EB4) GN=pepQ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 78/224 (34.82%), Postives = 114/224 (50.89%), Query Frame = 2
Query:    8 ENSAVLHYG---HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            ENSA+LHY    H A    R+F      L+D GA +  Y SDIT S+        D   +  A+      +IN M+PGV +  +H      + + L    ++ G+V  ++   + +VF PHGLGH LGI  HD GG+    KG   +       LR  REL    V+T+EPG Y ID+LL    +++  S+  N   +   + FGG+RIE +V+V  +  +NMT
Sbjct:  220 ENSAILHYTALEHTAPAQRRSF------LIDAGANFNGYASDITRSYAFEKNIFDD---LITAIDNMQLQIINLMQPGVSYAQLHVETHYKLAQILLDFDIVSGDVQGLVEQGITSVFFPHGLGHMLGIQVHDMGGFLGDDKGAHIAVPEAHPFLRCTRELDVNQVLTIEPGVYIIDSLLNELKQDKRQSQ-INWNTVEVLRPFGGIRIEDNVIVHRDRIENMT 433          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_YERPP (Xaa-Pro dipeptidase OS=Yersinia pestis (strain Pestoides F) GN=pepQ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 83/229 (36.24%), Postives = 122/229 (53.28%), Query Frame = 2
Query:    8 ENSAVLHYG---HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHN----AVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAAR-LGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            E+SAVLHY    H      R+F      L+D GAEY  Y +D+T ++      T+D+   + A++   N    A+I+ +K G  + D H    + I + L+   ++ G  +E M  + +   F+PHGLGH LG+  HD  G+    KGT  +       LR  R LQ RMV+T+EPG YFID+LL P    E  SK FN + I   K +GG+RIE ++++     +NMT
Sbjct:  222 EHSAVLHYTILQHQPPAEIRSF------LIDAGAEYNGYAADLTRTY------TADRDSDFAALISDLNTEQLALIDTIKSGERYTDYHVQMHQRIAKLLRTHNLVTGISEEAMVEQGITCPFLPHGLGHPLGLQVHDTAGFMQDDKGTNLNAPSKYPYLRCTRVLQPRMVLTIEPGLYFIDSLLAPWRIGE-FSKHFNWDRIDALKPYGGIRIEDNIVIHDKRVENMT 437          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_YERPN (Xaa-Pro dipeptidase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=pepQ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 83/229 (36.24%), Postives = 122/229 (53.28%), Query Frame = 2
Query:    8 ENSAVLHYG---HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHN----AVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAAR-LGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            E+SAVLHY    H      R+F      L+D GAEY  Y +D+T ++      T+D+   + A++   N    A+I+ +K G  + D H    + I + L+   ++ G  +E M  + +   F+PHGLGH LG+  HD  G+    KGT  +       LR  R LQ RMV+T+EPG YFID+LL P    E  SK FN + I   K +GG+RIE ++++     +NMT
Sbjct:  222 EHSAVLHYTILQHQPPAEIRSF------LIDAGAEYNGYAADLTRTY------TADRDSDFAALISDLNTEQLALIDTIKSGERYTDYHVQMHQRIAKLLRTHNLVTGISEEAMVEQGITCPFLPHGLGHPLGLQVHDTAGFMQDDKGTNLNAPSKYPYLRCTRVLQPRMVLTIEPGLYFIDSLLAPWRIGE-FSKHFNWDRIDALKPYGGIRIEDNIVIHDKRVENMT 437          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_YERPG (Xaa-Pro dipeptidase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=pepQ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 83/229 (36.24%), Postives = 122/229 (53.28%), Query Frame = 2
Query:    8 ENSAVLHYG---HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHN----AVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAAR-LGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            E+SAVLHY    H      R+F      L+D GAEY  Y +D+T ++      T+D+   + A++   N    A+I+ +K G  + D H    + I + L+   ++ G  +E M  + +   F+PHGLGH LG+  HD  G+    KGT  +       LR  R LQ RMV+T+EPG YFID+LL P    E  SK FN + I   K +GG+RIE ++++     +NMT
Sbjct:  222 EHSAVLHYTILQHQPPAEIRSF------LIDAGAEYNGYAADLTRTY------TADRDSDFAALISDLNTEQLALIDTIKSGERYTDYHVQMHQRIAKLLRTHNLVTGISEEAMVEQGITCPFLPHGLGHPLGLQVHDTAGFMQDDKGTNLNAPSKYPYLRCTRVLQPRMVLTIEPGLYFIDSLLAPWRIGE-FSKHFNWDRIDALKPYGGIRIEDNIVIHDKRVENMT 437          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_YERPE (Xaa-Pro dipeptidase OS=Yersinia pestis GN=pepQ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 83/229 (36.24%), Postives = 122/229 (53.28%), Query Frame = 2
Query:    8 ENSAVLHYG---HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHN----AVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAAR-LGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            E+SAVLHY    H      R+F      L+D GAEY  Y +D+T ++      T+D+   + A++   N    A+I+ +K G  + D H    + I + L+   ++ G  +E M  + +   F+PHGLGH LG+  HD  G+    KGT  +       LR  R LQ RMV+T+EPG YFID+LL P    E  SK FN + I   K +GG+RIE ++++     +NMT
Sbjct:  222 EHSAVLHYTILQHQPPAEIRSF------LIDAGAEYNGYAADLTRTY------TADRDSDFAALISDLNTEQLALIDTIKSGERYTDYHVQMHQRIAKLLRTHNLVTGISEEAMVEQGITCPFLPHGLGHPLGLQVHDTAGFMQDDKGTNLNAPSKYPYLRCTRVLQPRMVLTIEPGLYFIDSLLAPWRIGE-FSKHFNWDRIDALKPYGGIRIEDNIVIHDKRVENMT 437          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_YERPA (Xaa-Pro dipeptidase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pepQ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 83/229 (36.24%), Postives = 122/229 (53.28%), Query Frame = 2
Query:    8 ENSAVLHYG---HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHN----AVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAAR-LGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            E+SAVLHY    H      R+F      L+D GAEY  Y +D+T ++      T+D+   + A++   N    A+I+ +K G  + D H    + I + L+   ++ G  +E M  + +   F+PHGLGH LG+  HD  G+    KGT  +       LR  R LQ RMV+T+EPG YFID+LL P    E  SK FN + I   K +GG+RIE ++++     +NMT
Sbjct:  222 EHSAVLHYTILQHQPPAEIRSF------LIDAGAEYNGYAADLTRTY------TADRDSDFAALISDLNTEQLALIDTIKSGERYTDYHVQMHQRIAKLLRTHNLVTGISEEAMVEQGITCPFLPHGLGHPLGLQVHDTAGFMQDDKGTNLNAPSKYPYLRCTRVLQPRMVLTIEPGLYFIDSLLAPWRIGE-FSKHFNWDRIDALKPYGGIRIEDNIVIHDKRVENMT 437          
The following BLAST results are available for this feature:
BLAST of CX676452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
PEPQ_ACTP23.112e-2832.59Xaa-Pro dipeptidase OS=Actinobacillus pleuropneumo... [more]
PEPQ_SHEPA6.933e-2834.82Xaa-Pro dipeptidase OS=Shewanella pealeana (strain... [more]
PEPQ_SODGM9.055e-2835.59Xaa-Pro dipeptidase OS=Sodalis glossinidius (strai... [more]
PEPQ_EDWI99.055e-2835.29Xaa-Pro dipeptidase OS=Edwardsiella ictaluri (stra... [more]
PEPQ_SHEHH1.545e-2734.82Xaa-Pro dipeptidase OS=Shewanella halifaxensis (st... [more]
PEPQ_YERPP3.441e-2736.24Xaa-Pro dipeptidase OS=Yersinia pestis (strain Pes... [more]
PEPQ_YERPN3.441e-2736.24Xaa-Pro dipeptidase OS=Yersinia pestis bv. Antiqua... [more]
PEPQ_YERPG3.441e-2736.24Xaa-Pro dipeptidase OS=Yersinia pestis bv. Antiqua... [more]
PEPQ_YERPE3.441e-2736.24Xaa-Pro dipeptidase OS=Yersinia pestis GN=pepQ PE=... [more]
PEPQ_YERPA3.441e-2736.24Xaa-Pro dipeptidase OS=Yersinia pestis bv. Antiqua... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_69H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-69H05-O9-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676452 ID=CX676452; Name=CX676452; organism=Citrus sinensis; type=EST; length=917bp
CACTGGTGAGAACAGTGCTGTTCTCCATTATGGGCATGCGGCAGCTCCAA
ATGACAGGACCTTTGAAGATGGAGATATGGCATTGCTTGATATGGGAGCT
GAGTACCAATTTTACGGGTCTGACATTACTTGCTCATTCCCTGTAAATGG
GAAGTTTACAAGTGATCAGAGTCTTATATATAATGCCGTCCTCAAAGCTC
ACAATGCTGTCATAAATGCAATGAAACCTGGAGTGTGCTGGGTGGATATG
CACAAATTGGCAGAGAAAATTATTCTGGAGTCGCTGAAGAAGGGTGGTGT
CATGGTTGGGAATGTGGATGAGATGATGGCTGCACGATTGGGTGCTGTTT
TCATGCCTCATGGTCTTGGGCATTTCTTGGGTATTGACACTCATGATCCT
GGCGGCTACCCAAAGGGAACAGAAAGATCAAAAGAACCTGGCTTAAAATC
TCTACGTACAGTTAGAGAACTCCAGGAGAGAATGGTGATCACAGTGGAGC
CTGGATGTTATTTCATTGATGCTCTGTTGGTCCCAGCCATGGAAAATGAA
AGCACTTCCAAGTTTTTTAATCATGAAGTAATTGGCAGATTCAAAGATTT
TGGCGGTGTTCGCATTGAAAGTGATGTGCTTGTCACTGCCAATGGAAGCA
AGAACATGACTAGTGTACCTCGGGAAATATCAGATATTGAAGCCATAATG
GCAGGCGCTCCATGGCCTTCTAACAAGACTGCTCCATCAAATAGTTGAAA
GTAGTGCCAAAGATCTAAGAATAAGGCTCTGTTAGTGGAAGTTTTGGTCA
TAAACACCAAATTTCTTGTTAGAATTATGAGCCAATTATTTTGAAACTGG
AACTCTGAAACTAGAATTTTATCAAATGGCAAGTGCTTGTCGTTCTCACA
ATTGAATTTGAGTGGTT
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