CX676449

Overview
NameCX676449
Unique NameCX676449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676449 vs. ExPASy Swiss-Prot
Match: HIOM_CHICK (Hydroxyindole O-methyltransferase OS=Gallus gallus GN=ASMT PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 66/218 (30.28%), Postives = 94/218 (43.12%), Query Frame = -3
Query:  214 WFGLKKQILEGGIAFNKAHGMQIYDYLGVDSRFNDV---FNNGMLSHTSIVMEKVLESYKGFEHXXXXXXXXXXXGITLNMIISKYPHIKGINYDLPYVIKDA------PSYSGIEHIGGDLF-ESIPEADTIFMKWMLHSFDDEQALKVLKNCYKALPDGGKLLNINSTISEMPGNNVASREISILDTVLLVQLPHGRERTKHEYTELAVKAGFKGV 837
            W  L   + EG   + +A G+   D  G   R  +    F  G  S  SI    VL ++                 +    +   YP+     YDLP V++ A      P    I    GD F +SIPEAD   +  +LH +DD++  ++L   YKA   GG +L + S +SE     V   E  +    +LVQ   G+ERT  EY+EL   AGF+ V
Sbjct:  118 WHYLTDAVREGRNQYERAFGISSKDLFGARYRSEEEMLKFLAGQNSIWSICGRDVLTAFDLSPFTQIYDLGGGGGALAQECVFL-YPNCTVTIYDLPKVVQVAKERLVPPEERRIAFHEGDFFKDSIPEADLYILSKILHDWDDKKCRQLLAEVYKACRPGGGVLLVESLLSEDRSGPV---ETQLYSLNMLVQ-TEGKERTAVEYSELLGAAGFREV 330          
BLAST of CX676449 vs. ExPASy Swiss-Prot
Match: OMT4_DICDI (O-methyltransferase 4 OS=Dictyostelium discoideum GN=omt4 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = -3
Query:  220 IISKYPHIKGINYDLPYVIKDAPSY---SGIEHIGGDLFESIPEADTIFMKWMLHSFDDEQALKVLKNCYKALPDGGKLLNINSTISEMPGNNVASREISILDTVLLVQLPHGRERTKHEYTELAVKAGFK 603
            I+ KYP+  GIN+DL      A        +EH  G+ FES+PE D   +K +LH + DE  +K+L+   K++  GGK++  +  I+  P N   ++    LD V++       E+T  +++ ++ KAGFK
Sbjct:  194 ILEKYPNSHGINFDLESFFNGAGELIKNPRLEHKSGNFFESVPEGDCYILKRILHDWKDEDCIKILETIGKSILPGGKVIIFDCIIN--PKN--YNKGHLYLD-VMMFHFFGSEEKTIKQFSNISDKAGFK 319          
The following BLAST results are available for this feature:
BLAST of CX676449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
HIOM_CHICK1.163e-1130.28Hydroxyindole O-methyltransferase OS=Gallus gallus... [more]
OMT4_DICDI7.538e-1132.82O-methyltransferase 4 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_69G10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-69G10-M19-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676449 ID=CX676449; Name=CX676449; organism=Citrus sinensis; type=EST; length=905bp
TTTTTTTTCTTTCTAAGAGACGTATTATTTTCATAAGATGAAAGAAAGTA
CATAAGACAAGCCCCAAGGCCAAGCAAAAGAGAAAATAATTAACACAAAT
AGGAAATTGGAAACTCCCCAAGGGTTGAGAAGATCTTTCCAAAATGAAAT
TAAGTATGCAATTTATTTGAAGAATTCCATAACATATAAATTGCACGCAC
CATAATCATAGTTGACACCTTTAAATCCAGCTTTGACTGCCAATTCAGTG
TACTCGTGTTTGGTCCGCTCTCTTCCATGAGGAAGTTGGACTAACAAAAC
CGTATCCAAAATAGAGATTTCCCTTGAAGCTACATTATTCCCAGGCATTT
CCGAAATTGTCGAATTAATATTAAGCAGCTTCCCACCATCTGGAAGAGCT
TTATAACAATTCTTCAACACTTTCAAGGCTTGTTCATCATCAAAACTATG
AAGCATCCACTTCATAAAAATAGTATCTGCCTCAGGAATACTTTCGAACA
AATCTCCACCGATATGTTCTATCCCTGAATAAGATGGGGCATCTTTAATA
ACATAAGGTAAGTCATAATTAATACCCTTAATATGAGGGTATTTCGAAAT
TATCATATTAAGAGTGATCCCCAAGCCACCGCCAACATCCACAAGCTTTT
TAACATGCTCAAAGCCTTTGTATGATTCTAGGACCTTCTCCATGACAATA
GAAGTGTGACTTAACATTCCATTGTTGAAAACATCATTGAACCTTGAGTC
GACGCCTAAGTAATCATAGATTTGCATTCCGTGCGCTTTATTAAACGCAA
TTCCTCCTTCAAGAATTTGCTTTTTCAATCCAAACCAGCCATCCAAGCAG
ATCTTGTCGAGACACAAGGCCATGTAGGGACGCAACGACACGCCGTCTCG
ATTGT
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