CX676447

Overview
NameCX676447
Unique NameCX676447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX676447 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.896e-50
Identity = 104/243 (42.80%), Postives = 145/243 (59.67%), Query Frame = -2 
Query:  186 ESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKILYIKPPGNIYSFNDLVSLWERKIGKTLERVYVPEEQVLKNIQEAAPPVNVILSIQHSAFVKGDQTNFQIEPSFGVEASQLYPQVKYTTVDEYLSQFV 908
            E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RTLNK ++ +P  N YS N+L SLWE+KIG+TL R  V  +++L +  E   P +++ S  H  F+ G Q NF I+    VE   LYP  K+ ++D+    FV
Sbjct:   75 ECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDDCYEDFV 317
The following BLAST results are available for this feature:
BLAST of CX676447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN2.896e-5042.80Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_69G09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-69G09-M17-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676447 ID=CX676447; Name=CX676447; organism=Citrus sinensis; type=EST; length=924bp
TTTTTTTTTATTTAATCACTGTGTACTGACATAGCGGACATAATATCGTG
TTACAAATTCCATTGAGAACCAAACGAAAGTAAGGCCAACAACCATAATG
CTTACATATAGAAACCAAAGATGGCAACAAGCCAATTATTTATTTCCCAA
GATCCTGCAAGCTGCAGCTCAACAGAGAAGGGTTACACAAACTGACTGAG
ATACTCATCAACTGTAGTGTACTTGACTTGAGGATAAAGCTGCGAGGCTT
CAACTCCAAACGATGGTTCAATCTGGAAGTTGGTTTGATCTCCCTTCACG
AAAGCAGAGTGCTGAATTGATAATATCACATTGACTGGAGGTGCAGCTTC
TTGAATATTCTTTAGGACTTGCTCCTCCGGAACGTACACCCTTTCGAGGG
TTTTGCCAATCTTTCTCTCCCACAAGGACACAAGATCATTGAATGAGTAA
ATATTACCAGGGGGTTTAATGTAAAGGATTTTGTTCAAGGTTCTGGGATC
ATCAACCGCTTTGATAGTATAGGTTCCAATATCATCTTCCTTGTTATAAA
CAGCTTTAGGATTTCCATCGCCTAAGATGACAACTTTATCCCTAGGTGGG
GCAGTGGCCCCGGGCTGCGACAAATTGGGAAGGAAGTAAGCAGCAAAGAA
ATTCGACGCTACATAAGTATACGGAATCCCTTCAGCCTCAACGGCTCGGC
GGATTTTCGCCTTTGTGGCAAATGCTGATTTTGCTGGCTCAACGGCATGG
ACTCGATCAACATCATTCCCAAATTCTGAAGGGAAGAATCTCTTAATGTT
ACCAGCTTCTTTAATGGCCGCAATAATCTTGACCTGATCACCTAATAAAG
TGTGACCGACCGTTGATATCACCACGTCCACTTGTTTTATCGCCTTCACC
AAGCTCTCGTGATTCAACACATCT
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