FC921881

Overview
NameFC921881
Unique NameFC921881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.393e-33
Identity = 64/70 (91.43%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCP P+LIKGLRAHTDAGG+ILLFQDDKVSGLQLLKDGQWIDVPP+RHSIV+NLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.393e-33
Identity = 65/70 (92.86%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIV+NLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.393e-33
Identity = 64/70 (91.43%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAH+DAGGIILLFQDDKVSGLQLLKDG+W+DVPP+ HSIV+NLGDQIEVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.376e-33
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKV+GLQLLKDGQWIDVPP+R SIVVNLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.376e-33
Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCP PDL+KGLRAHTDAGGIILLFQDDKVSGLQLLKDG+W+DVPP++HSIVVNLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.540e-32
Identity = 61/70 (87.14%), Postives = 70/70 (100.00%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCP+P+LIKGLRAHTDAGGIILLFQD+KVSGLQLLKDG+WIDVPP++HSIV+N+GDQ+EVITNG
Sbjct:  158 KVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.540e-32
Identity = 64/70 (91.43%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD +WI+VPPLR+SIVVN+GDQ+EVITNG
Sbjct:  162 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNG 231          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.012e-32
Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KV+NYPPCPK DLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP++HSIV+NLGDQ+EVITNG
Sbjct:  158 KVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.012e-32
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVS+YPPCP+PDL+KGLRAHTDAGGIILLFQDD V GLQLLKDG+W+DVPP+RHSIVVNLGDQ+EVITNG
Sbjct:  164 KVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNG 233          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.627e-32
Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD VSGLQLLKD +WIDVPP+RHSIVVN+GDQ+EVITNG
Sbjct:  156 KVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNG 225          
The following BLAST results are available for this feature:
BLAST of FC921881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
ACCO_PRUMU1.393e-3391.431-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO_PEA1.393e-3392.861-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_MALDO1.393e-3391.431-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO_TOBAC2.376e-3394.291-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO1_ARATH2.376e-3390.001-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO_ACTDE1.540e-3287.141-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO2_DORSP1.540e-3291.431-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO_DIOKA2.012e-3290.001-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_ORYSI2.012e-3287.141-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_DENCR2.627e-3290.001-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]

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Properties
Property NameValue
Genbank descriptionC06053E02T7 RindPdigS Citrus sinensis cDNA clone C06053E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921881 ID=FC921881; Name=FC921881; organism=Citrus sinensis; type=EST; length=214bp
CCAAAGTTAGCAACTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGT
CTCCGGGCTCACACCGACGCCGGCGGCATCATCTTGCTCTTCCAGGATGA
CAAAGTCAGTGGCCTTCAGCTTCTTAAAGATGGCCAGTGGATTGATGTGC
CCCCATTGCGCCACTCCATTGTTGTCAACCTCGGTGACCAAATTGAGGTG
ATCACCAATGGAAT
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