FC921881

Overview
NameFC921881
Unique NameFC921881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.787e-12
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 3
Query:    6 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNG 212
            ++ YP CP+PDL  G+R HTD G I +L Q D V GLQ  +DG   WI V P+  + VVNLGD    ++NG
Sbjct:  200 INYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNG 269          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.787e-12
Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 3
Query:    6 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNG 212
            V+ YP CP+P+L  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG
Sbjct:  200 VNYYPKCPQPNLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNG 269          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.787e-12
Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 3
Query:    6 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNG 212
            V+ YP CP+PDL  GL+ HTD G I LL Q D V GLQ  +DG   WI V P+  + VVNLGD    ++NG
Sbjct:  202 VNFYPRCPQPDLTLGLKRHTDPGTITLLLQ-DLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNG 271          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.148e-11
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 3
Query:    6 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD--GQWIDVPPLRHSIVVNLGDQIEVITNG 212
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    ++NG
Sbjct:  198 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNG 267          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.148e-11
Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 3
Query:    6 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNG 212
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD   +++NG
Sbjct:  200 VNFYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNG 269          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.148e-11
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 3
Query:    6 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNG 212
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    ++NG
Sbjct:  199 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNG 268          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11
Identity = 29/65 (44.62%), Postives = 47/65 (72.31%), Query Frame = 3
Query:   15 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITN 209
            YP CP+P+L  G   H+D+G + +L QD ++ GLQ+L + QWIDVP +  ++V+N+ D +++ITN
Sbjct:  253 YPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITN 316          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.557e-11
Identity = 28/70 (40.00%), Postives = 47/70 (67.14%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  +GQW+    + +SI++++GD IE+++NG
Sbjct:  217 KINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNG 285          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.557e-11
Identity = 30/71 (42.25%), Postives = 51/71 (71.83%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG-QWIDVPPLRHSIVVNLGDQIEVITNG 212
            ++++YP CP+PD   GL AHTD+  + +L+Q++  +GLQ+ +D   W+  PP+  S+VVN+GD + ++TNG
Sbjct:  206 QLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNN-TAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNG 275          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.557e-11
Identity = 27/65 (41.54%), Postives = 45/65 (69.23%), Query Frame = 3
Query:   15 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITN 209
            YPPCP+PDL  G   H+D   + +L  D ++ GLQ+ ++G W DVP +  ++++N+GD +++ITN
Sbjct:  226 YPPCPEPDLTLGTSQHSDNSFLTVLLPD-QIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITN 289          
The following BLAST results are available for this feature:
BLAST of FC921881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
FNSI_PETCR8.787e-1249.30Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_PETCR8.787e-1250.70Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_HORVU8.787e-1252.11Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FL3H_MATIN1.148e-1150.70Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_MALDO1.148e-1150.70Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FL3H_ARATH1.148e-1150.70Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
DV4H_CATRO1.499e-1144.62Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
LDOX_PETHY2.557e-1140.00Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
G3OX2_ARATH2.557e-1142.25Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
ACCH3_ARATH2.557e-1141.541-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionC06053E02T7 RindPdigS Citrus sinensis cDNA clone C06053E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921881 ID=FC921881; Name=FC921881; organism=Citrus sinensis; type=EST; length=214bp
CCAAAGTTAGCAACTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGT
CTCCGGGCTCACACCGACGCCGGCGGCATCATCTTGCTCTTCCAGGATGA
CAAAGTCAGTGGCCTTCAGCTTCTTAAAGATGGCCAGTGGATTGATGTGC
CCCCATTGCGCCACTCCATTGTTGTCAACCTCGGTGACCAAATTGAGGTG
ATCACCAATGGAAT
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