FC921879

Overview
NameFC921879
Unique NameFC921879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.048e-41
Identity = 72/112 (64.29%), Postives = 93/112 (83.04%), Query Frame = 1
Query:   97 NFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            +FPVI++ N+NG    ++L +IN+ACE WGFFELVNHGI  E MD VE+LTK HYRKCMEQ FKE+VAS+ L+ ++TE+ND DWESTF++RHLP S ++E+ DLDEEY+KVM
Sbjct:    4 DFPVINMNNLNGESRVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEMVASKGLDSVETEINDTDWESTFFLRHLPVSNMSEIGDLDEEYKKVM 115          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 5.287e-41
Identity = 72/114 (63.16%), Postives = 94/114 (82.46%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            M  FPV+ L  +NG E AA LEKIN+ACE WGFFELVNHG+  E +DTVE++TK HY+K MEQ FKE+VA++ L+ +Q+E++D+DWESTF++RHLP S I+E+PDL+EEYRK M
Sbjct:    1 MATFPVVDLSLVNGEERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEMVAAKGLDDVQSEIHDLDWESTFFLRHLPSSNISEIPDLEEEYRKTM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 5.846e-40
Identity = 71/114 (62.28%), Postives = 93/114 (81.58%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            M  FPV+ ++ ING E AA LEKIN+ACE WGFFELVNHGI  E +DTVE++ K HY+K MEQ FKE+VA++ LE +Q+E++ +DWESTF++RHLP S I+E+PDL+E+YRK M
Sbjct:    1 MATFPVVDMDLINGEERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPSSNISEIPDLEEDYRKTM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 9.971e-40
Identity = 69/114 (60.53%), Postives = 94/114 (82.46%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP++ +  +N  +  + +E I +ACE WGFFE VNHGI  E MDTVE+LTK HY+KCMEQ FKE+VA++ LE +Q+E++D+DWESTF++RHLP S+I+E+PDLD++YRKVM
Sbjct:    1 MENFPIVDMGKLNTEDRKSTMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLECVQSEIDDLDWESTFFLRHLPVSSISEIPDLDDDYRKVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.221e-39
Identity = 72/114 (63.16%), Postives = 92/114 (80.70%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            M  FP+I+LENIN    A ILE+I +AC+ WGFFELVNHGI  EF+D VE++T+ HY+KCME+ FKE V S+ LE  Q EVNDMDWESTF++RHLP+S I+++ DLDEEY+K+M
Sbjct:    1 MAVFPIINLENINDDGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEAAQAEVNDMDWESTFFLRHLPESNISQMSDLDEEYKKIM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 3.789e-39
Identity = 68/114 (59.65%), Postives = 93/114 (81.58%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ME+FP+I+LE +NG E A  +EKI +ACE WGFFE VNHGI  E +D VE++TK HY+KCME+ FKE + +R L+ +++EVND+DWESTFY++HLP S I++VPDLD++YR +M
Sbjct:    1 MESFPIINLEKLNGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.880e-38
Identity = 72/114 (63.16%), Postives = 92/114 (80.70%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            M++FPVI++E + G E AA ++ IN+ACE WGFFELVNH I  E MD VERLTK HY+KCMEQ FKEL+AS+ +EG   + NDMDWESTF++RHLP S ++E+PDL +E+RKVM
Sbjct:    1 MDSFPVINMEKLEGQERAATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELMASK-VEGAVVDANDMDWESTFFIRHLPVSNLSEIPDLTDEHRKVM 113          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 8.176e-34
Identity = 62/115 (53.91%), Postives = 87/115 (75.65%), Query Frame = 1
Query:   97 NFPVISLE---NINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            NFP+I +E   N NG E + +L++I +AC  WGFF++VNH +  E MD VER+TK HY+K  EQ FK++V ++ L   +++VND+DWESTFY+RH P S I+EVPDLD++YRK+M
Sbjct:    6 NFPIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISEVPDLDDQYRKLM 120          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.908e-31
Identity = 56/111 (50.45%), Postives = 79/111 (71.17%), Query Frame = 1
Query:  100 FPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            FPV+ L  + G E    +  IN+ACE WGFFE+VNHG+  + MD  E++TK HY+  MEQ F +++ S+ LE ++ EV D+DWESTFY+RHLPQS + ++PD+ +EYR  M
Sbjct:    7 FPVVDLSKLIGEERDQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLEREVEDVDWESTFYLRHLPQSNLYDIPDMSDEYRTAM 117          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.084e-29
Identity = 56/113 (49.56%), Postives = 81/113 (71.68%), Query Frame = 1
Query:  100 FPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQ--TEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            FPVI++E + G E  A +E++++ACE WGFFE++NHGI  E MD VE++TK HY++  EQ F E  +    EG     +   +DWESTF+VRHLP+S I ++PDLD++YR++M
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLM 119          
The following BLAST results are available for this feature:
BLAST of FC921879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ACCO3_CUCME4.048e-4164.291-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO1_MALDO5.287e-4163.161-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO2_MALDO5.846e-4062.281-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO_PEA9.971e-4060.531-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_CUCME2.221e-3963.161-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO1_ARATH3.789e-3959.651-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO_PERAE1.880e-3863.161-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_DIACA8.176e-3453.91Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_BRAJU2.908e-3150.451-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_ORYSJ2.084e-2949.561-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionC06053D12T7 RindPdigS Citrus sinensis cDNA clone C06053D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921879 ID=FC921879; Name=FC921879; organism=Citrus sinensis; type=EST; length=512bp
CGCGGGGGCACTAATTAACAAGCTCACAAACACATACACATACACAAACA
CTCACAAACACACAGCTTGTTAAAGAAAGAATTCAGAGATATGGAGAACT
TCCCCGTTATCAGCTTGGAGAACATCAATGGTGCTGAAGGAGCGGCTATC
TTGGAGAAGATCAACGAGGCCTGTGAGAAATGGGGCTTCTTTGAGCTGGT
GAATCATGGAATTGAGCCGGAGTTTATGGACACAGTGGAGAGATTGACCA
AGGCGCATTACAGAAAATGCATGGAGCAAGGATTCAAGGAGCTTGTTGCA
AGCAGGGCACTTGAAGGTATCCAAACCGAGGTCAATGACATGGACTGGGA
AAGCACTTTCTATGTGCGTCACCTCCCTCAGTCGACCATCAATGAAGTCC
CAGATCTTGATGAGGAATACAGGAAGGTGATGAAGGAATTTGCATTGAAA
TTGGAGAAATTAGCAGAGGAGCTATTGGACTTGTTATGCGAGAATCTTGG
AATAGAGAAGGG
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