CX676398

Overview
NameCX676398
Unique NameCX676398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.153e-56
Identity = 114/170 (67.06%), Postives = 125/170 (73.53%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            D FRK MEPV   LRDAK+ KS VH+VVLVGGSTRIPKVQQLL DFFNGKE  KSINPDE           ILSG + ++K+QD             ETAGGVMT LI RNTT+PTKK Q FSTY+DNQPGVLIQ++EGER+ TRDNNLLGKF L GIPP PRGVPQI V
Sbjct:  310 DYFRKTMEPVAPVLRDAKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPNKSINPDEPVAYGATVQAAILSGNDSSQKLQDLLLLDVTPLSLGLETAGGVMTTLIARNTTVPTKKSQTFSTYADNQPGVLIQLFEGERSMTRDNNLLGKFNLDGIPPMPRGVPQIDV 479          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 3.355e-56
Identity = 111/170 (65.29%), Postives = 128/170 (75.29%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            DLFR  M+PVE+ LRDAK+DKSSVH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +             ETAGGVMT LI RNTTIPTKK + FST++DNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  306 DLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEV 475          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 5.723e-56
Identity = 109/170 (64.12%), Postives = 129/170 (75.88%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            DLFR  ++PV++ L DAK+DKS VH++VLVGGSTRIP++Q+L+ D+FNGKE  KSINPDE           ILSG+ + K   +             ETAGG+MT LIPRNTTIPTKK +VFST+SDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  306 DLFRSTLQPVDRVLTDAKIDKSQVHEIVLVGGSTRIPRIQKLISDYFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTSEILLLDVAPLSLGIETAGGMMTKLIPRNTTIPTKKSEVFSTFSDNQPGVLIQVYEGERQRTKDNNLLGKFELTGIPPAPRGVPQIEV 475          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 9.762e-56
Identity = 109/169 (64.50%), Postives = 123/169 (72.78%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            D FR  + PVEK L+DA MDK SVH+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG+ +  VQD             ETAGGVMT LI RNTTIP KK Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI V
Sbjct:  321 DYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSINPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEV 489          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 9.762e-56
Identity = 109/169 (64.50%), Postives = 123/169 (72.78%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            D FR  + PVEK L+DA MDK SVH+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG+ +  VQD             ETAGGVMT LI RNTTIP KK Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI V
Sbjct:  321 DYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSINPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEV 489          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 9.762e-56
Identity = 113/170 (66.47%), Postives = 128/170 (75.29%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            DLFR  MEPVE+ LRDAK+DKSSVH++VLVGGSTRIPK+Q+L+ D+FN KE  KSINPDE           ILSG+ + K   +             ETAGGVMT L+ RNTTIPTKK + FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  306 DLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQRLVSDYFN-KEANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSVGIETAGGVMTPLVKRNTTIPTKKSETFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQIEV 474          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.275e-55
Identity = 109/169 (64.50%), Postives = 126/169 (74.56%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K+ Q+FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V
Sbjct:  307 DLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTQIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEV 475          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.175e-55
Identity = 113/170 (66.47%), Postives = 128/170 (75.29%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            DLFR  MEPVE+ LRDAK+DKSSVH++VLVGGSTRIPK+Q+L+ DFFN K+  KSINPDE           ILSG+ + K   +             ETAGGVMT LI RNTTIPTKK + FSTYSDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQI V
Sbjct:  176 DLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKLVSDFFN-KDANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEV 344          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 3.710e-55
Identity = 108/169 (63.91%), Postives = 126/169 (74.56%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K+ ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V
Sbjct:  307 DLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEV 475          
BLAST of CX676398 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 3.710e-55
Identity = 108/169 (63.91%), Postives = 126/169 (74.56%), Query Frame = 1
Query:    1 DLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 507
            DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K+ ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V
Sbjct:  307 DLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEV 475          
The following BLAST results are available for this feature:
BLAST of CX676398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_BRELC1.153e-5667.06Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP72_PARBA3.355e-5665.29Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_NEUCR5.723e-5664.12Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_PLAFA9.762e-5664.50Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_PLACB9.762e-5664.50Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP70_EMENI9.762e-5666.47Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP74_ANOAL1.275e-5564.50Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_PENCI2.175e-5566.47Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP72_ANOAL3.710e-5563.91Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL3.710e-5563.91Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_69D01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-69D01-G1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676398 ID=CX676398; Name=CX676398; organism=Citrus sinensis; type=EST; length=508bp
GATCTGTTCAGAAAATGCATGGAGCCAGTTGAGAAGTGTTTGAGGGATGC
CAAGATGGACAAGAGCTCAGTCCATGATGTTGTTCTTGTCGGAGGATCTA
CTAGGATTCCCAAAGTCCAGCAGCTTTTGCAAGATTTCTTTAATGGGAAG
GAGCTTTGCAAGAGCATCAACCCCGATGAGGCTGTTGCCTATGGTGCTGC
TGTGCAAGCTGCTATCTTGAGTGGTGAGGGTAATGAGAAGGTGCAGGATC
TTCTGCTATTGGATGTCACACCTCTCTCCCTTGGTTTGGAGACTGCTGGT
GGTGTCATGACTGTGTTGATTCCAAGGAACACAACCATTCCCACCAAGAA
GGAGCAGGTCTTCTCAACTTACTCTGACAACCAACCTGGTGTGTTGATCC
AAGTCTATGAAGGCGAAAGGACAAGAACCAGGGACAATAACTTGTTGGGT
AAATTTGAGCTCTCTGGTATTCCCCCAGCTCCTAGGGGTGTTCCTCAAAT
CACTGTGT
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