FC921876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26 Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+I LL GAREA+FRNIK+IAECLA+ELINAAK SSNSYAIKKKDELERVAKSNR Sbjct: 158 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.684e-26 Identity = 59/71 (83.10%), Postives = 67/71 (94.37%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVD+SPLRRVNQ+I L+T GAREA+FRNIK+IAECLA+ELINAAK SSNSYAIKKKDE+ERVAK+NR Sbjct: 137 VRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5B_DROME (40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.873e-26 Identity = 60/71 (84.51%), Postives = 66/71 (92.96%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+I L+ GAREA+FRNIK++AECLA+ELINAAK SSNSYAIKKKDELERVAKSNR Sbjct: 160 VRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.752e-26 Identity = 60/71 (84.51%), Postives = 66/71 (92.96%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDV+PLRRVNQ+I LL GAREA+FRN+K+IAECLA+ELINAAK SSNSYAIKKKDELERVAKSNR Sbjct: 140 VRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 4.901e-26 Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+I LL GAREA+FRNIK+IAECLA+ELINA K SSNSYAIKKKDELERVAKSNR Sbjct: 134 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSSNSYAIKKKDELERVAKSNR 204
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_NICPL (40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia GN=RPS5 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.359e-26 Identity = 58/71 (81.69%), Postives = 67/71 (94.37%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVD+SPLRRV+Q+I LLT GARE++FRNIK+IAECLA+ELINAAK SSNSYAIKKKDE+ERVAK+NR Sbjct: 84 VRRQAVDISPLRRVSQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 154
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_DICDI (40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.634e-21 Identity = 49/71 (69.01%), Postives = 61/71 (85.92%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSP+RRVN ++ LLT G R A+FRNI+++AECLA+ELINA+K S NSY+IK+KD LER AKS+R Sbjct: 120 VRRQAVDVSPMRRVNHAVYLLTQGTRAAAFRNIRTVAECLADELINASKGSPNSYSIKQKDALERTAKSHR 190
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_ENTHI (40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.761e-18 Identity = 43/68 (63.24%), Postives = 57/68 (83.82%), Query Frame = 3 Query: 12 QAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 QAVDVSPLRR+N ++ LL +G R +FRN KS+AECLA+E++NA+KS + S+AI KK++LERVA SNR Sbjct: 81 QAVDVSPLRRINHALYLLIMGCRCGAFRNSKSLAECLADEIVNASKSYTGSFAIMKKEDLERVANSNR 148
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_ENCCU (40S ribosomal protein S5 OS=Encephalitozoon cuniculi GN=RPS5 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.132e-14 Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 3 Query: 9 RQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 R +VDVSPL+R++ +IS L+ G R ASFRN ++AE +A ELI A+ +S NSYA+ KK E+ER+A+SNR Sbjct: 140 RTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKEIERIAQSNR 208
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_AERPE (30S ribosomal protein S7P OS=Aeropyrum pernix GN=rps7p PE=3 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.303e-14 Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 3 Query: 9 RQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 R +VDV+P RRV+Q++ + GAR+ +F N K I ECLAEELI AA+ SYAI++K+E+ER+A S+R Sbjct: 137 RVSVDVAPQRRVDQALKFIADGARQCAFNNPKPIEECLAEELILAARGDPRSYAIRQKEEIERIALSSR 205 The following BLAST results are available for this feature:
BLAST of FC921876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921876 ID=FC921876; Name=FC921876; organism=Citrus sinensis; type=EST; length=323bpback to top |