FC921876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_THEVO (30S ribosomal protein S7P OS=Thermoplasma volcanium GN=rps7p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.758e-13 Identity = 35/68 (51.47%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 12 QAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 ++VDVSP RRV++++ + GA ASF++ KSI CLA+E++ AAK+ ++S+AI KK+E+ERVA+S R Sbjct: 117 KSVDVSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMLAAKNDASSFAISKKEEIERVAQSAR 184
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_SULTO (30S ribosomal protein S7P OS=Sulfolobus tokodaii GN=rps7p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.758e-13 Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 AVDV+P RRV+ ++ L +GA+EASF N K I E LAEE+I AA + S+AI+KK+E+ER+A S+R Sbjct: 128 AVDVAPQRRVDLALRHLVMGAKEASFNNPKPIEEALAEEIIAAASNDPKSFAIRKKEEIERIALSSR 194
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_SULSO (30S ribosomal protein S7P OS=Sulfolobus solfataricus GN=rps7p PE=3 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 6.214e-13 Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 AVDVSP RR++ ++ + GA++ASF N K I E LAEE+I AA + S S+AIK+K+E+ER+A S+R Sbjct: 127 AVDVSPQRRIDLALRHIATGAKDASFNNPKPIEEVLAEEIIAAANNDSKSFAIKRKEEIERIALSSR 193
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_METTH (30S ribosomal protein S7P OS=Methanobacterium thermoautotrophicum GN=rps7p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.214e-13 Identity = 35/65 (53.85%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKS 209 AVD+SP RRV+ S+ +T GA +A+F+N KSI ECLA E++ AA+ + S+AI+KK+E ER+A+S Sbjct: 120 AVDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLANEIMLAAEYDTRSFAIQKKEEKERIARS 184
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_THENV (30S ribosomal protein S7P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps7p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.384e-12 Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 3 Query: 15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 +VDVSP RR++ ++ +T GAR SF N K I ECLA+EL+ AA + SYA++K++ELER+A ++R Sbjct: 158 SVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADELVAAAANDPKSYAVRKREELERIAAASR 224
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_PYRIL (30S ribosomal protein S7P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps7p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.384e-12 Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 3 Query: 15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 +VDVSP RR++ ++ +T GAR SF N K I ECLA+E+I AA + SYA++K++ELER+A ++R Sbjct: 158 SVDVSPQRRLDLALRWITEGARTCSFNNPKPIEECLADEIIAAASNDPRSYAVRKREELERIAAASR 224
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_THEAC (30S ribosomal protein S7P OS=Thermoplasma acidophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 34/68 (50.00%), Postives = 52/68 (76.47%), Query Frame = 3 Query: 12 QAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 ++VDVSP RRV++++ + GA ASF++ KSI CLA+E++ AA++ S+AI KK+E+ERVA+S R Sbjct: 117 KSVDVSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMAAARNDPTSFAISKKEEIERVAQSAR 184
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_PYRAE (30S ribosomal protein S7P OS=Pyrobaculum aerophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 3 Query: 15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 +VDVSP RR++ ++ +T GAR SF N K I ECLA+E+I AA + SYA++K++ELER+A ++R Sbjct: 157 SVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREELERIAAASR 223
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_SULAC (30S ribosomal protein S7P OS=Sulfolobus acidocaldarius GN=rps7p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.084e-12 Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 AVDV+P RRV+ ++ L GA EASF N K I E LAEE+I AA + + S AI+KK+E+ER+A S+R Sbjct: 129 AVDVAPQRRVDLALRHLVTGASEASFNNPKPIEEALAEEIIAAANNDNKSVAIRKKEEIERIALSSR 195
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_METST (30S ribosomal protein S7P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps7p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.084e-12 Identity = 32/65 (49.23%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKS 209 AVD++P RRV+ S+ +T GA +++F+N KS A+CLA+E++ A+ S S+A++KK+E ERVA+S Sbjct: 121 AVDIAPQRRVDLSLGFITKGAMQSAFKNKKSAAQCLADEILLASDEDSRSFAVQKKEEKERVARS 185 The following BLAST results are available for this feature:
BLAST of FC921876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921876 ID=FC921876; Name=FC921876; organism=Citrus sinensis; type=EST; length=323bpback to top |