FC921876

Overview
NameFC921876
Unique NameFC921876
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length323
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.816e-11
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 3 
Query:   15 AVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215
            +VD++PLRR++ ++  LT GAR  +F N  SI E LAEE+  AA +   SYA++KK+E+ER+A S+R
Sbjct:  132 SVDIAPLRRIDLALRHLTEGARLKAFHNPISIEEALAEEIALAASNDPKSYAVQKKEEIERIALSSR 198
The following BLAST results are available for this feature:
BLAST of FC921876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
RS7_DESK15.816e-1149.2530S ribosomal protein S7P OS=Desulfurococcus kamch... [more]

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Properties
Property NameValue
Genbank descriptionC06053D09T7 RindPdigS Citrus sinensis cDNA clone C06053D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921876 ID=FC921876; Name=FC921876; organism=Citrus sinensis; type=EST; length=323bp
CCGTCCTTCGTCAAGCCGTCGATGTGTCTCCCCTCCGTCGCGTGAACCAG
TCCATCTCTCTGCTCACCATCGGTGCCCGCGAGGCTTCTTTCCGCAACAT
CAAGAGCATTGCTGAGTGCCTTGCTGAGGAGCTGATCAACGCCGCCAAGA
GTTCCTCTAACTCCTACGCTATCAAGAAGAAGGATGAGCTCGAGCGTGTT
GCCAAGAGCAACCGGTAAAGGGGTAGTGTTGGATTTGTTCTCCGTATGGT
CCTCTGTTTGCGTATACTGGAGTGGACGGGGGTTTAACCGGGATTCAGTG
GATTCGCATGCATCTGCAAGGCT
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