EY649924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.729e-16 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 244 L +HE LITVEEG+IGGFGSHV Q L+ +G+ D K+R +VLPD +ID SPAD A AG+ + I V ++LG Sbjct: 557 LVANHEALITVEEGAIGGFGSHVAQLLSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.564e-16 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 LA+ H+VLIT+EEGSIGGFGSHV+Q LA G LD G V+ R +VLPD ++DH +P A GL I A VF LG+ Sbjct: 580 LARDHDVLITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.079e-16 Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 268 LA H L+TVEEGS+GGFGSHV+Q + +GLLD G VK R +VLPD YID + A QLA AGL I A V +LG+ + + + Sbjct: 554 LAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDRGAVKVRAMVLPDIYIDQETQARQLAAAGLDADAIVAKVEGLLGKAKAGVSL 639
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_RHIE6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.940e-16 Identity = 41/78 (52.56%), Postives = 56/78 (71.79%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 LA+ HE+LITVEEGS+GGFGS V+Q+L+ +GLLD +K R LV+PD +++ P A AGL + I +TVF LG+ Sbjct: 553 LARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS1_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain CCS1) GN=dxs1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.354e-15 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 244 LA+ HE LITVEEG++GGFGSHV LA + + D +K+R +VLPD +ID SP D A AG+ I A V LG Sbjct: 555 LARHHEALITVEEGAVGGFGSHVAHLLAENAVFDTGIKYRSMVLPDIFIDQASPKDMYAVAGMNAEDIVAKVLTTLG 631
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.147e-15 Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 17 AKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 A+ HE++ITVEEGS+GGFGS V+Q+L+ +GLLD +K R LV+PD +++ P A AGL + I +TVF LG+ Sbjct: 554 ARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.147e-15 Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 241 LA+ HE+LITVEEGS+GGFGS V+Q+L+ +GLLD +K R LV+PD +++ P A AGL + I +TVF L Sbjct: 553 LARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRAL 628
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_HYPNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Hyphomonas neptunium (strain ATCC 15444) GN=dxs PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.147e-15 Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 LA+ HEVL+T+EEGS GGFGS V++ LA G LD +K R + LPD + DH +PA QAGLT HIAA LG+ Sbjct: 551 LAREHEVLVTIEEGSRGGFGSFVLEHLANCGGLDAGLKVRVMTLPDVFQDHDTPAAMYDQAGLTARHIAARAIEALGR 628
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS1_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.956e-14 Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 241 LA HEVLI VEEG+IGGFG+HV +L GLLDG +K R L +PDR+ +H +P Q A+AG+ I V + L Sbjct: 555 LAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS2_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.336e-14 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 241 LA HEVLI VEEG+IGGF SHV +LA GLLDG +K R L +PDR+ +H +P Q A+AG+ I V + L Sbjct: 555 LAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630 The following BLAST results are available for this feature:
BLAST of EY649924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649924 ID=EY649924; Name=EY649924; organism=Citrus sinensis; type=EST; length=518bpback to top |