EY649924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_AGRVS (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dxs PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.357e-14 Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 262 LA+ H VLITVEEG++GGFGS V+ LA +GLLD +K R LVLPD ++D P +AGL I +TVF L +R+AL Sbjct: 553 LARHHAVLITVEEGAVGGFGSQVLHMLANEGLLDHGLKVRSLVLPDLWMDQAKPDVMYEKAGLDAKGIVSTVFTAL--SRDAL 633
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_ERYLH (1-deoxy-D-xylulose-5-phosphate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=dxs PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.432e-14 Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 265 L K+HEV++T+EE SIGG G+HV+ + + +GL D +K R + LPD +I+ +P Q +AGLT HI TV L Q +E Sbjct: 553 LMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTDAGLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPHIVDTVLKALRQNSAGVE 636
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.432e-14 Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 244 LA HE LIT+EEG+IGGFGSHV Q LA G+ D ++R +VLPD +IDH S A AGL + I LG Sbjct: 553 LAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_PELUB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelagibacter ubique GN=dxs PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.706e-14 Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 17 AKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 271 A+ HE +ITVEEGSIGGFGSHV L+ G+ D +K+R ++LPD +I+ SP AGL S I+ + +IL T+E+++++ Sbjct: 552 AREHEAMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIFIEQDSPKKMYDVAGLNASQISKKILDIL-FTKESIKVV 635
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS1_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.706e-14 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 253 L + H L+TVE+G++GGFG+HV+ +LA G DG + R + LPDR+I+ SP D A AGL IAAT L + R Sbjct: 556 LVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGR 635
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_MARMM (1-deoxy-D-xylulose-5-phosphate synthase OS=Maricaulis maris (strain MCS10) GN=dxs PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.268e-13 Identity = 40/84 (47.62%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 265 LA+ HEVLITVEEG++GGFG+ V+ LA G LD ++ R L LPD + D +P D AGL HIAA +G+ A E Sbjct: 551 LAREHEVLITVEEGAVGGFGAFVLHMLADKGALDRGLRIRTLTLPDVFQDQEAPFDMYETAGLNARHIAAKALEAMGKDDAAAE 634
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13 Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 265 L SHEV +T+EEG+IGG G+HV+ + GL+DG +K R + LPD + +H P Q A+AGL I ATV L + + LE Sbjct: 553 LLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLIDGGLKLRTMRLPDAFQEHDKPEKQYAEAGLDAESIVATVLAALHRNSKGLE 636
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_NOVAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 241 L +H+V++TVEEGSIGG G+HV+ + +GL+DG +K R + LPD + DH +P Q +AGL HI TV L Sbjct: 553 LMTTHDVIVTVEEGSIGGLGAHVLTMASDEGLVDGGLKIRTMRLPDLFQDHDAPEKQYDEAGLNAPHIVDTVLKAL 628
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.391e-12 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 8 SGLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 + L ++H+ LITVE+G++ GFG+ V+Q +A +GLLD K R + LPDR+ID +PA+ AGL I V +LG+ Sbjct: 554 ANLVQTHKALITVEQGAMAGFGAMVLQSMAAEGLLDLGCKVRTMCLPDRFIDQAAPAEMYRDAGLDTMGIVEQVTRVLGR 633
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.956e-12 Identity = 37/77 (48.05%), Postives = 44/77 (57.14%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 244 L H LITVE+G++ GFG V+ LA G LDG R L LPDR+ID SPA+ A AGLT IA +G Sbjct: 552 LMTKHSALITVEQGAVLGFGGLVLHHLAATGQLDGRCAVRTLHLPDRFIDQASPAEMYADAGLTADDIAQAALEAMG 628 The following BLAST results are available for this feature:
BLAST of EY649924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649924 ID=EY649924; Name=EY649924; organism=Citrus sinensis; type=EST; length=518bpback to top |