FC921867

Overview
NameFC921867
Unique NameFC921867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length384
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.164e-11
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 3 
Query:   54 VPPNGPATYSDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV-SARG 335
            +P +   + + WA +  F VGDTLV+ +      V +VT+ ++  CNTT+P +  +N    V L  SGP++FI     +C+ G+KL I V S+RG
Sbjct:   37 IPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSRG 131
[Close]
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.986e-11
Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 3 
Query:   51 IVPPNGPATYS--DWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAIN 320
            +V  +G  T++   W   + F  GD L+FN+    H+V  V Q  F+ CNT +     T+    + L   G  YFIC+FPGHC  G K+A+N
Sbjct:    4 VVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLP-KGQSYFICNFPGHCQSGMKIAVN 94
The following BLAST results are available for this feature:
BLAST of FC921867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ENL3_ARATH1.164e-1136.84Early nodulin-like protein 3 OS=Arabidopsis thalia... [more]
BABL_CUCSA1.986e-1136.96Basic blue protein OS=Cucumis sativus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC06053C12T7 RindPdigS Citrus sinensis cDNA clone C06053C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921867 ID=FC921867; Name=FC921867; organism=Citrus sinensis; type=EST; length=384bp
CAGAGCTCTAAAGACAGACAAGGCATGTGGTGGGTGATGCACTAGCCTTG
ATTGTTCCTCCTAATGGTCCTGCTACTTACTCTGACTGGGCTGCAAACCA
GACCTTCACCGTCGGTGACACTCTTGTGTTTAACTTTGCCGCTGGAAACC
ATGATGTTACTCGAGTAACACAATCATCATTCAATGCATGCAACACCACT
AGTCCCCTATCCAGAACCACAAATAGCCCTGCGAGTGTTACTCTTACAGC
TTCTGGGCCACACTACTTCATTTGCTCATTTCCAGGCCACTGCCTCGGCG
GTCAGAAATTAGCCATCAACGTTAGTGCCAGGGGATCTTCTCCTGCTCCT
CAACCTTCTTCTCCGGCCCCTCAGCCCGGCGGTA
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