EG358207

Overview
NameEG358207
Unique NameEG358207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length441
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6867 contig Csv1_Contig6867:22..462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358207 vs. ExPASy Swiss-Prot
Match: CYB5B_RAT (Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.301e-11
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYGLE----DTETSNNASFQ 202
            ++TRFL EHPGGEEVL+E AG DAT+ FE++GHS  A E+L  Y +G +    L+    D + S N S Q
Sbjct:   47 DITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPNDLKPKDGDKDPSKNNSCQ 116          
BLAST of EG358207 vs. ExPASy Swiss-Prot
Match: CYB5_ORYSJ (Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYGLEDTETSNNASFQEPKKK------EMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYR 322
            NV++FLE+HPGG++VL+ + GKDAT  FE++GHS  A  ++  Y VG +      DT T    +   P K+      +   F++K         +L+F VPL + G   A R
Sbjct:   33 NVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYVGDI------DTSTIPARTKYVPPKQPHYNQDKTPEFIIK---------ILQFLVPLAILGLAVAIR 129          
BLAST of EG358207 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.898e-11
Identity = 28/67 (41.79%), Postives = 48/67 (71.64%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYGLEDTETSNNASFQE 205
            N++ +++EHPGGEEV+++ AG DAT+ F++IGHS  AHE+L    +G L+G  + + + + + S +E
Sbjct:   35 NISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLKGAKIVEAKHAQSFSTEE 101          
BLAST of EG358207 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.898e-11
Identity = 33/100 (33.00%), Postives = 56/100 (56.00%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYGLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAG 304
            +VT F+++HPGG+EVL+ + GKDAT  FE++GHS  A +++  Y +G +    +  T T          + +   F++K         +L+F VP+L+ G
Sbjct:   32 DVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIGEIDSSTVPATRTYVAPVQPAYNQDKTPEFMIK---------ILQFLVPILILG 122          
BLAST of EG358207 vs. ExPASy Swiss-Prot
Match: CYB5B_HUMAN (Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYGLEDTETSNNAS 196
            +VTRFL EHPGGEEVL+E AG DA++ FE++GHS  A E+L  Y +G +    L+    S + S
Sbjct:   47 DVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPESGSKDPS 110          
The following BLAST results are available for this feature:
BLAST of EG358207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CYB5B_RAT1.301e-1150.00Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b... [more]
CYB5_ORYSJ2.219e-1135.71Cytochrome b5 OS=Oryza sativa subsp. japonica GN=O... [more]
CYB5_CANTR2.898e-1141.79Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB5_BRAOB2.898e-1133.00Cytochrome b5 OS=Brassica oleracea var. botrytis G... [more]
CYB5B_HUMAN3.785e-1150.00Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1... [more]

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Properties
Property NameValue
Genbank description6d12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl006d12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358207 ID=EG358207; Name=EG358207; organism=Citrus sinensis; type=EST; length=441bp
ACTGAACGTTACAAGGTTCCTGGAAGAACACCCAGGAGGAGAAGAAGTGC
TGATGGAGGCGGCAGGGAAGGATGCAACAAAGCAGTTTGAGGAAATTGGA
CACAGCAAGGCTGCTCACGAGTTGCTCTTCAACTACCGGGTGGGTGTTCT
TCAAGGTTACGGGTTAGAAGACACAGAAACATCCAATAATGCTTCATTCC
AGGAGCCCAAAAAGAAAGAGATGGAGGCTTTTGTCGTCAAGGATAATGGC
GTGCCTAAATATGCAGCTCTTCTCGAGTTCTTTGTGCCACTCTTGGTTGC
TGGTTCCTACTTTGCTTACAGGTATCTGGCCTGAGCCCAGAACATCCTTG
ACTGGATCATCCGCTTCCTCTTATATGTCTGCTTGATGAATTGCTGCAAG
TCTCGCTATCAGTAGGCAAGGCAACGAATGATTTAACCATG
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