FC921862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1_XENLA (DNA topoisomerase 1 OS=Xenopus laevis GN=top1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.324e-14 Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 13 SSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDE-ADTVGC 228 SS +KG+ +KYE AR+LK + IR Y +D+ S++ RQ AVA Y IDKLALRAGNEK++ E ADTVGC Sbjct: 488 SSRIKGEKDWQKYETARRLKMCVEKIRNTYKEDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGC 560
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1_RAT (DNA topoisomerase 1 OS=Rattus norvegicus GN=Top1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.324e-14 Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 13 SSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDE-ADTVGC 228 SS +KG+ +KYE AR+LK + IR Y +D+ S++ RQ AVA Y IDKLALRAGNEK++ E ADTVGC Sbjct: 434 SSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGC 506
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1_MOUSE (DNA topoisomerase 1 OS=Mus musculus GN=Top1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.324e-14 Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 13 SSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDE-ADTVGC 228 SS +KG+ +KYE AR+LK + IR Y +D+ S++ RQ AVA Y IDKLALRAGNEK++ E ADTVGC Sbjct: 434 SSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGC 506
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1_HUMAN (DNA topoisomerase 1 OS=Homo sapiens GN=TOP1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.324e-14 Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 13 SSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDE-ADTVGC 228 SS +KG+ +KYE AR+LK + IR Y +D+ S++ RQ AVA Y IDKLALRAGNEK++ E ADTVGC Sbjct: 432 SSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGC 504
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1_CERAE (DNA topoisomerase 1 OS=Cercopithecus aethiops GN=TOP1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.324e-14 Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 13 SSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDE-ADTVGC 228 SS +KG+ +KYE AR+LK + IR Y +D+ S++ RQ AVA Y IDKLALRAGNEK++ E ADTVGC Sbjct: 434 SSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGC 506
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1M_RAT (DNA topoisomerase I, mitochondrial OS=Rattus norvegicus GN=Top1mt PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.324e-14 Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 13 SSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDE-ADTVGC 228 SS KG+ +KYE AR+LK + IRA Y D+ S + +RQ+AVA Y IDKLALR GNEK++ E ADTVGC Sbjct: 261 SSKPKGEMDWQKYEVARRLKGVVDKIRAQYQADWKSPEMKKRQLAVALYFIDKLALRTGNEKEEGETADTVGC 333
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1M_MOUSE (DNA topoisomerase I, mitochondrial OS=Mus musculus GN=Top1mt PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.324e-14 Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 13 SSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDE-ADTVGC 228 SS KG+ +KYE AR+LK + IRA Y D+ S + +RQ+AVA Y IDKLALR GNEK++ E ADTVGC Sbjct: 261 SSKPKGEMDWQKYEVARRLKGVVDKIRAQYQADWKSPEMKKRQLAVALYFIDKLALRTGNEKEEGETADTVGC 333
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1_CRIGR (DNA topoisomerase 1 OS=Cricetulus griseus GN=TOP1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.635e-13 Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 13 SSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDE-ADTVGC 228 SS +KG+ +KYE AR+LK + IR Y +D+ S++ RQ AVA Y IDKLALRAGNEK++ E ADTV C Sbjct: 434 SSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVSC 506
BLAST of FC921862 vs. ExPASy Swiss-Prot
Match: TOP1_USTMA (DNA topoisomerase 1 OS=Ustilago maydis GN=TOP1 PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.402e-11 Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 10 ASSFLKGQSGREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVG 225 A+S K S REK+EKARKL + IR K+ S+ RQIA +LID +LRAGNEK +DEA+T G Sbjct: 385 ATSNFKTNSDREKFEKARKLDTVVKQIRRDVNKNLKSKVRHERQIATIVWLIDNFSLRAGNEKGEDEAETYG 456 The following BLAST results are available for this feature:
BLAST of FC921862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921862 ID=FC921862; Name=FC921862; organism=Citrus sinensis; type=EST; length=229bpback to top |