EG358200

Overview
NameEG358200
Unique NameEG358200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GRALE (Elongation factor Tu, chloroplastic (Fragment) OS=Gracilaria lemaneiformis GN=tufA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 7.079e-46
Identity = 92/145 (63.45%), Postives = 106/145 (73.10%), Query Frame = 1
Query:   25 KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            KNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVPN+VVFLNK                       Y FPGD++P ++GSAL ALE +  N +I+RGEN+WVDKI+ LMD+VD YIP P R  +  FL+AVEDVFSITGR
Sbjct:    1 KNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNIVVFLNKQDQVDDEELLELVELEVRELLGQYGFPGDNIPFVAGSALRALENITQNNTIQRGENEWVDKIHSLMDAVDEYIPTPVRDVEKTFLMAVEDVFSITGR 145          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BACHD (Elongation factor Tu OS=Bacillus halodurans GN=tuf PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 9.246e-46
Identity = 93/153 (60.78%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDG ILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S Y+FPGDDVP+I GSAL ALE          G+ +W +KI ELM +VD YIP P+R T+ PF++ VEDVFSITGR
Sbjct:   83 CPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRQVGVPYLVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIRGSALKALE----------GDAEWEEKIIELMAAVDDYIPTPERDTEKPFMMPVEDVFSITGR 225          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_ANOFW (Elongation factor Tu OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tuf PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 9.246e-46
Identity = 94/153 (61.44%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S Y+FPGD+VP+I GSAL ALE          G+  W  KI ELM++VD YIP PQR+ D PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALE----------GDPAWEAKIIELMNAVDEYIPTPQREVDKPFMMPVEDVFSITGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_ACHLI (Elongation factor Tu OS=Acholeplasma laidlawii (strain PG-8A) GN=tuf PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 9.246e-46
Identity = 93/153 (60.78%), Postives = 108/153 (70.59%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S Y+FPGDD+P+I GSAL ALE          G+ +WV K+ ELMD+VD+YI  P R TD PF++ VEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPKLVVFLNKADLVDDEELLDLVEMEVRELLSEYDFPGDDIPVIKGSALGALE----------GKPEWVAKVEELMDAVDAYIDTPLRATDKPFMMPVEDVFTITGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_DESHY (Elongation factor Tu OS=Desulfitobacterium hafniense (strain Y51) GN=tuf PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.208e-45
Identity = 94/153 (61.44%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VV+LNK                     S YEFPGDD+PII GS L AL+           + +W  KI+ LMD+VDSYIP P+R TD PFL+ VEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVWLNKADMVDDPELMELVEMEIRELLSEYEFPGDDIPIIPGSGLKALQC-----GCGSRDCEWCGKIWNLMDAVDSYIPTPERATDKPFLMPVEDVFTITGR 229          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_DESHD (Elongation factor Tu OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=tuf PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.208e-45
Identity = 94/153 (61.44%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VV+LNK                     S YEFPGDD+PII GS L AL+           + +W  KI+ LMD+VDSYIP P+R TD PFL+ VEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVWLNKADMVDDPELMELVEMEIRELLSEYEFPGDDIPIIPGSGLKALQC-----GCGSRDCEWCGKIWNLMDAVDSYIPTPERATDKPFLMPVEDVFTITGR 229          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BREBN (Elongation factor Tu OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=tuf PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.208e-45
Identity = 95/153 (62.09%), Postives = 108/153 (70.59%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL+KQVGVP +VVF+NK                     S YEFPGDD P+I GSA  AL+    NP+      +W  KI ELM++VDSYIP P+R TD PFL+ VEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLSQYEFPGDDTPVIKGSAKEALD----NPT-----GEWAKKIGELMEAVDSYIPTPERATDKPFLMPVEDVFTITGR 225          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU2_SYNWW (Elongation factor Tu 2 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.208e-45
Identity = 91/153 (59.48%), Postives = 108/153 (70.59%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDG+ILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     S YEFPGDD+P++ GSAL ALE           E +W   I+ELMD+VDSYIP+PQR  D PFL+ +EDVF+ITGR
Sbjct:   82 CPGHADYIKNMITGAAQMDGSILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKIDMVDDPELLELVEMEVRELLSFYEFPGDDIPVLMGSALKALEC-----GCGTRECEWCKHIWELMDAVDSYIPLPQRAVDKPFLMPIEDVFTITGR 229          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU1_SYNWW (Elongation factor Tu 1 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.208e-45
Identity = 91/153 (59.48%), Postives = 108/153 (70.59%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDG+ILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     S YEFPGDD+P++ GSAL ALE           E +W   I+ELMD+VDSYIP+PQR  D PFL+ +EDVF+ITGR
Sbjct:   82 CPGHADYIKNMITGAAQMDGSILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKTDMVDDPELLELVEMEVRELLSFYEFPGDDIPVLMGSALKALEC-----GCGTRECEWCKHIWELMDAVDSYIPLPQRAVDKPFLMPIEDVFTITGR 229          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_MACCJ (Elongation factor Tu OS=Macrococcus caseolyticus (strain JCSC5402) GN=tuf PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.577e-45
Identity = 93/153 (60.78%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDG ILVVS ADGPMPQT+EHILL++ VGVP +VVFLNK                     S Y+FPGDDVP+I+GSAL ALE          G  ++ DKI ELMD+VD YIP P+R +D PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALE----------GVEEYEDKIMELMDAVDEYIPTPERDSDKPFMMPVEDVFSITGR 224          
The following BLAST results are available for this feature:
BLAST of EG358200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_GRALE7.079e-4663.45Elongation factor Tu, chloroplastic (Fragment) OS=... [more]
EFTU_BACHD9.246e-4660.78Elongation factor Tu OS=Bacillus halodurans GN=tuf... [more]
EFTU_ANOFW9.246e-4661.44Elongation factor Tu OS=Anoxybacillus flavithermus... [more]
EFTU_ACHLI9.246e-4660.78Elongation factor Tu OS=Acholeplasma laidlawii (st... [more]
EFTU_DESHY1.208e-4561.44Elongation factor Tu OS=Desulfitobacterium hafnien... [more]
EFTU_DESHD1.208e-4561.44Elongation factor Tu OS=Desulfitobacterium hafnien... [more]
EFTU_BREBN1.208e-4562.09Elongation factor Tu OS=Brevibacillus brevis (stra... [more]
EFTU2_SYNWW1.208e-4559.48Elongation factor Tu 2 OS=Syntrophomonas wolfei su... [more]
EFTU1_SYNWW1.208e-4559.48Elongation factor Tu 1 OS=Syntrophomonas wolfei su... [more]
EFTU_MACCJ1.577e-4560.78Elongation factor Tu OS=Macrococcus caseolyticus (... [more]

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Properties
Property NameValue
Genbank description10d5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358200 ID=EG358200; Name=EG358200; organism=Citrus sinensis; type=EST; length=461bp
TGCCCTGGCCACGCCGATTATGTTAAGAATATGATTACTGGCGCTGCCCA
AATGGACGGTGCGATTTTGGTGGTGTCCGGTGCTGATGGGCCAATGCCAC
AAACTAAAGAACATATTTTGTTGGCTAAGCAAGTGGGTGTCCCTAACATG
GTTGTGTTTTTGAATAAACAGGACCAGGTTGATGATGAAGAGCTGTTGCA
ACTTGTGGAATTGGAGGTTCGTGAGTTACTTTCTTCTTATGAATTTCCTG
GTGATGATGTGCCTATTATTTCTGGTTCTGCGCTCTTAGCTTTAGAGGCT
TTGATGGCTAATCCTAGTATTAAGAGAGGAGAGAATCAATGGGTTGATAA
GATTTATGAGCTTATGGATTCTGTTGATAGTTACATTCCTATCCCACAAA
GACAAACTGATTTGCCCTTTTTGTTAGCTGTTGAAGATGTGTTTTCAATT
ACTGGTCGTGG
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