EG358200

Overview
NameEG358200
Unique NameEG358200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_TRIEI (Elongation factor Tu OS=Trichodesmium erythraeum (strain IMS101) GN=tuf PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.090e-54
Identity = 104/153 (67.97%), Postives = 117/153 (76.47%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVPN+V+FLNK                     S Y+F GD++PI++GSAL A+EAL ANP I +GEN+WVDKI  LMD VD YIP P+R  D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNIVIFLNKQDMVDDEELLELVELEVRELLSDYDFDGDNIPIVAGSALQAVEALTANPGIGKGENEWVDKILSLMDEVDGYIPQPERDVDKPFLMAVEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP7 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.090e-54
Identity = 103/153 (67.32%), Postives = 116/153 (75.82%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDG ILVVS ADGPMPQT+EHILLAKQVGVPN+VVFLNK                     S YEFPGDD+PI+ GSAL A+EAL   P+IK+G+N WVDKI  LMD VD+YIP P+R  D PFL+A+EDVFSI+GR
Sbjct:   82 CPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLAKQVGVPNLVVFLNKEDMVDDEELLELVELEVRELLSEYEFPGDDIPIVKGSALKAVEALTDTPTIKKGDNDWVDKILALMDEVDAYIPTPERDIDKPFLMAIEDVFSISGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_CHACO (Elongation factor Tu, chloroplastic OS=Chara connivens GN=tufA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.090e-54
Identity = 103/153 (67.32%), Postives = 118/153 (77.12%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILVVS ADGPMPQTKEHILLAKQVGVP++VVFLNK                      +YEFPGD VP++SGSAL+AL+AL   P+  RGEN+WVDKIYELMD+VDSYIP P+R  + PFL+ +EDVFSI GR
Sbjct:   82 CPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPSIVVFLNKEDQVDDEEILQLVDLEVRESLINYEFPGDKVPVVSGSALMALQALTEKPNTSRGENKWVDKIYELMDAVDSYIPTPKRDIEKPFLMPIEDVFSIQGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_THAPS (Elongation factor Tu, chloroplastic OS=Thalassiosira pseudonana GN=tufA PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.423e-54
Identity = 102/153 (66.67%), Postives = 119/153 (77.78%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVP++VVFLNK                     S+Y+FPGDD+PI  GSAL A+EAL +NP +KRG+N WVDKI+ LMD+VD+YIP P+R  +  FL+A+EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPHIVVFLNKQDQVDDDELLELVELEVRELLSTYDFPGDDIPICPGSALQAIEALSSNPDVKRGDNPWVDKIFALMDAVDAYIPTPERDVEKTFLMAIEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_PORPU (Elongation factor Tu, chloroplastic OS=Porphyra purpurea GN=tufA PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.423e-54
Identity = 103/153 (67.32%), Postives = 119/153 (77.78%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVP +VVFLNK                     S Y+FPGDD+P ++GSALLALEA+  N SIK+GE++WVDKI+ LM++VD+YIP P+R  D  FL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPTLVVFLNKEDQVDDEELLELVELEGRELLSQYDFPGDDIPFVAGSALLALEAVTKNTSIKKGEDKWVDKIFSLMEAVDTYIPTPERDVDKTFLMAVEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP4 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=tuf PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.423e-54
Identity = 103/153 (67.32%), Postives = 118/153 (77.12%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVV+  DG MPQTKEHILLAKQVGVP++VVFLNK                     +SY+F GD++PII GS L+ALEA+  NP  +RG+N+WVDKIYELMD+VDSYIP P+R  D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVAATDGAMPQTKEHILLAKQVGVPSIVVFLNKVDQLDDEELLELVELELRELLTSYDFDGDNIPIIRGSGLMALEAMTGNPKTQRGDNEWVDKIYELMDAVDSYIPTPERDVDKPFLMAVEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BIGNA (Elongation factor Tu, chloroplastic OS=Bigelowiella natans GN=tufA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 1.859e-54
Identity = 104/153 (67.97%), Postives = 116/153 (75.82%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEH+LLAKQVGVP++VVFLNK                      +Y+FPGD  PII GSAL+AL+ALM    + RG N WVDKI  LMD+VD YIP P+R+TD PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHLLLAKQVGVPSIVVFLNKEDQVDDEELLELVELEIREMLDTYDFPGDSTPIIKGSALMALQALMETDEMSRGSNPWVDKILTLMDNVDEYIPTPERETDKPFLMAVEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_CYCME (Elongation factor Tu, chloroplastic OS=Cyclotella meneghiniana GN=tufA PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 3.170e-54
Identity = 101/153 (66.01%), Postives = 119/153 (77.78%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVP++VVFLNK                     S+Y+FPGDD+PI  GS L A+EA+ +NP++KRG+N WVDKIY LMD+VD+YIP P+R  +  FL+A+EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPHIVVFLNKQDQVDDDELLELVELEVRELLSTYDFPGDDIPICPGSRLQAIEAISSNPTLKRGDNPWVDKIYALMDAVDAYIPTPERDVEKTFLMAIEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_DEISP (Elongation factor Tu OS=Deinonema sp. GN=tuf PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.141e-54
Identity = 103/153 (67.32%), Postives = 118/153 (77.12%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VVF+NK                     S YEFPGDD+P+I GSAL ALEAL ANP   RGE++WVD+I+EL+D+VDSYIP P+R TD  FL+ VEDVF+ITGR
Sbjct:   83 CPGHADYVKNMITGAAQMDGAILVVSSADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDEELLELVEMEVRELLSKYEFPGDDLPVIKGSALQALEALQANPKTARGEDKWVDRIWELLDAVDSYIPTPERATDKTFLMPVEDVFTITGR 235
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_CHAVU (Elongation factor Tu, chloroplastic OS=Chara vulgaris GN=tufA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.141e-54
Identity = 102/153 (66.67%), Postives = 118/153 (77.12%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILVVS ADGPMPQTKEHILLAKQVGVP++VVFLNK                      +YEFPGD VP+++GSAL+AL+AL   P+  RGEN+WVDKIYELMD+VDSYIP P+R  + PFL+ +EDVFSI GR
Sbjct:   82 CPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPSIVVFLNKEDQVDDEEILQLVDLEVRESLINYEFPGDKVPVVAGSALMALQALTEKPNTLRGENKWVDKIYELMDAVDSYIPTPKRDIEKPFLMPIEDVFSIQGR 234
The following BLAST results are available for this feature:
BLAST of EG358200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_TRIEI1.090e-5467.97Elongation factor Tu OS=Trichodesmium erythraeum (... [more]
EFTU_CYAP71.090e-5467.32Elongation factor Tu OS=Cyanothece sp. (strain PCC... [more]
EFTU_CHACO1.090e-5467.32Elongation factor Tu, chloroplastic OS=Chara conni... [more]
EFTU_THAPS1.423e-5466.67Elongation factor Tu, chloroplastic OS=Thalassiosi... [more]
EFTU_PORPU1.423e-5467.32Elongation factor Tu, chloroplastic OS=Porphyra pu... [more]
EFTU_CYAP41.423e-5467.32Elongation factor Tu OS=Cyanothece sp. (strain PCC... [more]
EFTU_BIGNA1.859e-5467.97Elongation factor Tu, chloroplastic OS=Bigelowiell... [more]
EFTU_CYCME3.170e-5466.01Elongation factor Tu, chloroplastic OS=Cyclotella ... [more]
EFTU_DEISP4.141e-5467.32Elongation factor Tu OS=Deinonema sp. GN=tuf PE=3 ... [more]
EFTU_CHAVU4.141e-5466.67Elongation factor Tu, chloroplastic OS=Chara vulga... [more]

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Properties
Property NameValue
Genbank description10d5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358200 ID=EG358200; Name=EG358200; organism=Citrus sinensis; type=EST; length=461bp
TGCCCTGGCCACGCCGATTATGTTAAGAATATGATTACTGGCGCTGCCCA
AATGGACGGTGCGATTTTGGTGGTGTCCGGTGCTGATGGGCCAATGCCAC
AAACTAAAGAACATATTTTGTTGGCTAAGCAAGTGGGTGTCCCTAACATG
GTTGTGTTTTTGAATAAACAGGACCAGGTTGATGATGAAGAGCTGTTGCA
ACTTGTGGAATTGGAGGTTCGTGAGTTACTTTCTTCTTATGAATTTCCTG
GTGATGATGTGCCTATTATTTCTGGTTCTGCGCTCTTAGCTTTAGAGGCT
TTGATGGCTAATCCTAGTATTAAGAGAGGAGAGAATCAATGGGTTGATAA
GATTTATGAGCTTATGGATTCTGTTGATAGTTACATTCCTATCCCACAAA
GACAAACTGATTTGCCCTTTTTGTTAGCTGTTGAAGATGTGTTTTCAATT
ACTGGTCGTGG
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