EG358200

Overview
NameEG358200
Unique NameEG358200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:1..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_ANASP (Elongation factor Tu OS=Anabaena sp. (strain PCC 7120) GN=tuf PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.141e-54
Identity = 103/153 (67.32%), Postives = 114/153 (74.51%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVV+  DGPMPQT+EHILLAKQVGVP +VVFLNK                     + YEF GDD+PI+ GS L ALE +  NP  +RGEN WVDKIYELMD+VDSYIP P+R  D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLAKQVGVPKLVVFLNKEDMMEDAELLELVELELRELLTEYEFDGDDIPIVRGSGLQALEVMTKNPKTQRGENPWVDKIYELMDAVDSYIPDPERDIDKPFLMAVEDVFSITGR 234          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_SYNP6 (Elongation factor Tu OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tuf PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 5.408e-54
Identity = 102/153 (66.67%), Postives = 119/153 (77.78%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVPN+VVFLNK                     SSY+FPGDD+PI++GSAL ALEA+    S ++G+N WVDKI +LM+ VD+YIP P+R+ D PFL+AVEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNIVVFLNKEDMVDDAELLELVELEVRELLSSYDFPGDDIPIVAGSALQALEAIQGGASGQKGDNPWVDKILKLMEEVDAYIPTPEREVDRPFLMAVEDVFTITGR 234          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_SYNE7 (Elongation factor Tu OS=Synechococcus elongatus (strain PCC 7942) GN=tuf PE=3 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 5.408e-54
Identity = 102/153 (66.67%), Postives = 119/153 (77.78%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVPN+VVFLNK                     SSY+FPGDD+PI++GSAL ALEA+    S ++G+N WVDKI +LM+ VD+YIP P+R+ D PFL+AVEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNIVVFLNKEDMVDDAELLELVELEVRELLSSYDFPGDDIPIVAGSALQALEAIQGGASGQKGDNPWVDKILKLMEEVDAYIPTPEREVDRPFLMAVEDVFTITGR 234          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GLOVI (Elongation factor Tu OS=Gloeobacter violaceus GN=tufA PE=3 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 5.408e-54
Identity = 102/153 (66.67%), Postives = 118/153 (77.12%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVPN+VVFLNK                     S Y+FPGDDVPI++GSAL+ALE + + P + RG++ WVD IY LMD+VD+YIP P+R  D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPNIVVFLNKKDQLDDPELLELVELEVRELLSKYDFPGDDVPIVAGSALMALEKMASEPKLIRGKDDWVDCIYSLMDAVDAYIPTPERAIDKPFLMAVEDVFSITGR 234          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_DEIGD (Elongation factor Tu OS=Deinococcus geothermalis (strain DSM 11300) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 9.224e-54
Identity = 102/153 (66.67%), Postives = 116/153 (75.82%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VVF+NK                     S YEFPGDD+P+I GSAL ALEAL  NP   RGEN WVDKI+EL+D++D+YIP P+R TD  FL+ VEDVF+ITGR
Sbjct:   83 CPGHADYVKNMITGAAQMDGAILVVSSADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDEELLELVEMEVRELLSKYEFPGDDLPVIKGSALQALEALQQNPKTARGENPWVDKIWELLDAIDAYIPTPERATDKTFLMPVEDVFTITGR 235          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_ANAVT (Elongation factor Tu OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tuf PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 9.224e-54
Identity = 102/153 (66.67%), Postives = 114/153 (74.51%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVV+  DGPMPQT+EHILLAKQVGVP +VVFLNK                     + YEF GDD+PI+ GS L AL+ +  NP  +RGEN WVDKIYELMD+VDSYIP P+R  D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLAKQVGVPKLVVFLNKEDMMEDAELLELVELELRELLTEYEFDGDDIPIVRGSGLQALDVMTKNPKTQRGENPWVDKIYELMDAVDSYIPDPERDIDKPFLMAVEDVFSITGR 234          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_THEAQ (Elongation factor Tu OS=Thermus aquaticus GN=tuf PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 1.205e-53
Identity = 100/153 (65.36%), Postives = 116/153 (75.82%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VVF+NK                     + YEFPGD+VP+I GSALLALE +  NP  KRGEN+WVDKI+EL+D++D YIP P R  D PFL+ VEDVF+ITGR
Sbjct:   83 CPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGR 235          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.205e-53
Identity = 103/153 (67.32%), Postives = 116/153 (75.82%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVPN+VVFLNK                       Y+FPGDD+P ++GSALLALE +  N SI+RGEN+WVDKI+ LMD+VD YIP P R  +  FL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNVVVFLNKQDQVDDEELLELVELEVRELLIQYDFPGDDIPFVAGSALLALEKVTENNSIQRGENEWVDKIHSLMDAVDEYIPTPVRDVEKTFLMAVEDVFSITGR 234          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GONPE (Elongation factor Tu, chloroplastic (Fragment) OS=Gonium pectorale GN=tufA PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.205e-53
Identity = 105/145 (72.41%), Postives = 113/145 (77.93%), Query Frame = 1
Query:   25 KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPN+VVFLNK                       YEFPGD++P+I GSALLALEAL+ NP  +RGEN WVDKIY+LMD VDSYIP PQR+TD PFLLAVEDV SITGR
Sbjct:    1 KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVDDKELLELVELEVRETLDKYEFPGDEIPVIPGSALLALEALIENPKTQRGENPWVDKIYQLMDKVDSYIPTPQRETDKPFLLAVEDVLSITGR 145          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_CYAA5 (Elongation factor Tu OS=Cyanothece sp. (strain ATCC 51142) GN=tuf PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.205e-53
Identity = 102/153 (66.67%), Postives = 119/153 (77.78%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVP++VVFLNK                     S Y+FPGDD+PIISGSAL+A+ AL+ NP+IK GEN+W D++ ELM +VD  IP P+R+ D PFL+AVEDVFSI+GR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPSLVVFLNKKDQVDDEELLELVELEVRELLSEYDFPGDDIPIISGSALMAVNALIDNPNIKPGENEWTDQVLELMKAVDDNIPEPEREIDKPFLMAVEDVFSISGR 234          
The following BLAST results are available for this feature:
BLAST of EG358200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_ANASP4.141e-5467.32Elongation factor Tu OS=Anabaena sp. (strain PCC 7... [more]
EFTU_SYNP65.408e-5466.67Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_SYNE75.408e-5466.67Elongation factor Tu OS=Synechococcus elongatus (s... [more]
EFTU_GLOVI5.408e-5466.67Elongation factor Tu OS=Gloeobacter violaceus GN=t... [more]
EFTU_DEIGD9.224e-5466.67Elongation factor Tu OS=Deinococcus geothermalis (... [more]
EFTU_ANAVT9.224e-5466.67Elongation factor Tu OS=Anabaena variabilis (strai... [more]
EFTU_THEAQ1.205e-5365.36Elongation factor Tu OS=Thermus aquaticus GN=tuf P... [more]
EFTU_GRATL1.205e-5367.32Elongation factor Tu, chloroplastic OS=Gracilaria ... [more]
EFTU_GONPE1.205e-5372.41Elongation factor Tu, chloroplastic (Fragment) OS=... [more]
EFTU_CYAA51.205e-5366.67Elongation factor Tu OS=Cyanothece sp. (strain ATC... [more]

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Properties
Property NameValue
Genbank description10d5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358200 ID=EG358200; Name=EG358200; organism=Citrus sinensis; type=EST; length=461bp
TGCCCTGGCCACGCCGATTATGTTAAGAATATGATTACTGGCGCTGCCCA
AATGGACGGTGCGATTTTGGTGGTGTCCGGTGCTGATGGGCCAATGCCAC
AAACTAAAGAACATATTTTGTTGGCTAAGCAAGTGGGTGTCCCTAACATG
GTTGTGTTTTTGAATAAACAGGACCAGGTTGATGATGAAGAGCTGTTGCA
ACTTGTGGAATTGGAGGTTCGTGAGTTACTTTCTTCTTATGAATTTCCTG
GTGATGATGTGCCTATTATTTCTGGTTCTGCGCTCTTAGCTTTAGAGGCT
TTGATGGCTAATCCTAGTATTAAGAGAGGAGAGAATCAATGGGTTGATAA
GATTTATGAGCTTATGGATTCTGTTGATAGTTACATTCCTATCCCACAAA
GACAAACTGATTTGCCCTTTTTGTTAGCTGTTGAAGATGTGTTTTCAATT
ACTGGTCGTGG
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