EG358200

Overview
NameEG358200
Unique NameEG358200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:1..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GLOS1 (Elongation factor Tu (Fragment) OS=Gloeothece sp. (strain PCC 6501) GN=tufA PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.167e-48
Identity = 95/145 (65.52%), Postives = 110/145 (75.86%), Query Frame = 1
Query:   25 KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            KNMITGAAQMDG ILVVS ADGPMPQT+EHILLAKQVGVP++VVFLNK                     S Y+FPGDD+PI+ GSAL A+EAL A P+ K+G+N+WVDKI +LMD VD YIP P+R+ D PFL+AVEDVFSITGR
Sbjct:    1 KNMITGAAQMDGGILVVSAADGPMPQTREHILLAKQVGVPSLVVFLNKEDQVDDAELLELVELEVRELLSIYDFPGDDIPIVIGSALKAVEALTATPTTKKGDNEWVDKILKLMDEVDEYIPTPEREIDKPFLMAVEDVFSITGR 145          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_LYSSC (Elongation factor Tu OS=Lysinibacillus sphaericus (strain C3-41) GN=tuf PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.600e-48
Identity = 96/153 (62.75%), Postives = 110/153 (71.90%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDG ILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     S Y+FPGDD+P+I GSAL ALE          GE +W +KI ELMD+VDSYIP P+RQTD PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRQVGVPYLVVFMNKCDMVDDEELLELVEMEIRDLLSEYDFPGDDIPVIKGSALKALE----------GEPEWEEKIVELMDAVDSYIPTPERQTDKPFMMPVEDVFSITGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_ODOSI (Elongation factor Tu, chloroplastic OS=Odontella sinensis GN=tufA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 3.395e-48
Identity = 95/153 (62.09%), Postives = 112/153 (73.20%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL+KQVGVP++VVFLNK                     S+Y+F         GSAL A+EA+ +NP+IKRG+N WVDKI+ LMD+VD YIP P+R  +  FL+A+EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPDIVVFLNKEDQVDDAELLELVELEVRELLSAYDFQVMTFRFAPGSALQAIEAISSNPAIKRGDNPWVDKIFALMDAVDEYIPTPERDIEKTFLMAIEDVFSITGR 234          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_PHOEC (Elongation factor Tu (Fragment) OS=Phormidium ectocarpi GN=tufA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 9.878e-48
Identity = 94/145 (64.83%), Postives = 111/145 (76.55%), Query Frame = 1
Query:   25 KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            KNMITGAAQMDGAILV S ADGPMPQT+EHILL+KQVGVP++VVFLNK                     SSY+FPGDD+PI++GSAL A+EAL AN SI +GE++WVDKI++L+  VD YIP P+R  D PFL+AVEDVFSITGR
Sbjct:    1 KNMITGAAQMDGAILVCSAADGPMPQTREHILLSKQVGVPHIVVFLNKQDQVDDEELLELVELEVRELLSSYDFPGDDIPIVAGSALKAVEALQANSSIGKGEDEWVDKIHDLVAQVDEYIPAPERDIDKPFLMAVEDVFSITGR 145          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BRYPL (Elongation factor Tu, chloroplastic (Fragment) OS=Bryopsis plumosa GN=tufA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 9.878e-48
Identity = 96/145 (66.21%), Postives = 108/145 (74.48%), Query Frame = 1
Query:   25 KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVP++VVFLNK                     + YEFPGDD+PI SGSALLALEAL  NP   R  + WV KIY+LM+ VD+YIP+P R TD PFL+A+E+V SITGR
Sbjct:    1 KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPSIVVFLNKADQVDDEELLELVELEVRETLNEYEFPGDDIPITSGSALLALEALTENPDTNRTGDPWVKKIYDLMNEVDNYIPLPTRDTDKPFLMAIENVVSITGR 145          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_KOSOT (Elongation factor Tu OS=Kosmotoga olearia (strain TBF 19.5.1) GN=tuf PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.290e-47
Identity = 94/153 (61.44%), Postives = 112/153 (73.20%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILVV+  DG MPQT+EH+LLA+QV VP MVVF+NK                     S YEFPGD+VP+I GSAL+ALEA   NP     ++ WV KIYELMD+VD+Y+P PQR+TD PFL+ +ED+FSITGR
Sbjct:   82 CPGHADYIKNMITGAAQMDGAILVVAATDGVMPQTREHVLLARQVNVPAMVVFINKVDMVDDEELVELVEEEVRDLLSKYEFPGDEVPVIKGSALMALEA--DNP-----DDPWVQKIYELMDAVDNYVPEPQRETDKPFLMPIEDIFSITGR 227          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_MOOTA (Elongation factor Tu OS=Moorella thermoacetica (strain ATCC 39073) GN=tuf PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.874e-47
Identity = 93/153 (60.78%), Postives = 111/153 (72.55%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VVFLNK                     + YEFPGD++PI++GSAL A+E         + E +W  K++ELMD+VDSYIP P+R TD PFL+ +EDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKVDQVDDPELLELVEMEVRELLTEYEFPGDEIPIVTGSALKAMEC-----GCGKRECEWCGKVWELMDAVDSYIPTPERDTDKPFLMPIEDVFTITGR 229          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GEOTN (Elongation factor Tu OS=Geobacillus thermodenitrificans (strain NG80-2) GN=tuf PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 6.403e-47
Identity = 95/153 (62.09%), Postives = 109/153 (71.24%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S Y+FPGD+VP+I GSAL ALE          G+ QW +KI ELM++VD YIP PQR+ D PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALE----------GDAQWEEKIVELMNAVDEYIPTPQREVDKPFMMPVEDVFSITGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GEOKA (Elongation factor Tu OS=Geobacillus kaustophilus GN=tuf PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 8.362e-47
Identity = 94/153 (61.44%), Postives = 109/153 (71.24%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S Y+FPGD+VP+I GSAL ALE          G+ QW +KI ELM++VD YIP PQR+ D PF++ +EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALE----------GDPQWEEKIIELMNAVDEYIPTPQREVDKPFMMPIEDVFSITGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_DESRM (Elongation factor Tu OS=Desulfotomaculum reducens (strain MI-1) GN=tuf PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 8.362e-47
Identity = 95/153 (62.09%), Postives = 109/153 (71.24%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     +SYEFPGDD PI++GS L ALE         + E +W  KI+ELMD+VD+YIP P+R  D PFL+ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKSDMVDDEELLELVDMEVRELLNSYEFPGDDTPIVAGSGLKALEC-----GCGKRECEWCGKIWELMDNVDAYIPTPERAVDKPFLMPVEDVFSITGR 229          
The following BLAST results are available for this feature:
BLAST of EG358200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_GLOS11.167e-4865.52Elongation factor Tu (Fragment) OS=Gloeothece sp. ... [more]
EFTU_LYSSC2.600e-4862.75Elongation factor Tu OS=Lysinibacillus sphaericus ... [more]
EFTU_ODOSI3.395e-4862.09Elongation factor Tu, chloroplastic OS=Odontella s... [more]
EFTU_PHOEC9.878e-4864.83Elongation factor Tu (Fragment) OS=Phormidium ecto... [more]
EFTU_BRYPL9.878e-4866.21Elongation factor Tu, chloroplastic (Fragment) OS=... [more]
EFTU_KOSOT1.290e-4761.44Elongation factor Tu OS=Kosmotoga olearia (strain ... [more]
EFTU_MOOTA2.874e-4760.78Elongation factor Tu OS=Moorella thermoacetica (st... [more]
EFTU_GEOTN6.403e-4762.09Elongation factor Tu OS=Geobacillus thermodenitrif... [more]
EFTU_GEOKA8.362e-4761.44Elongation factor Tu OS=Geobacillus kaustophilus G... [more]
EFTU_DESRM8.362e-4762.09Elongation factor Tu OS=Desulfotomaculum reducens ... [more]

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Properties
Property NameValue
Genbank description10d5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358200 ID=EG358200; Name=EG358200; organism=Citrus sinensis; type=EST; length=461bp
TGCCCTGGCCACGCCGATTATGTTAAGAATATGATTACTGGCGCTGCCCA
AATGGACGGTGCGATTTTGGTGGTGTCCGGTGCTGATGGGCCAATGCCAC
AAACTAAAGAACATATTTTGTTGGCTAAGCAAGTGGGTGTCCCTAACATG
GTTGTGTTTTTGAATAAACAGGACCAGGTTGATGATGAAGAGCTGTTGCA
ACTTGTGGAATTGGAGGTTCGTGAGTTACTTTCTTCTTATGAATTTCCTG
GTGATGATGTGCCTATTATTTCTGGTTCTGCGCTCTTAGCTTTAGAGGCT
TTGATGGCTAATCCTAGTATTAAGAGAGGAGAGAATCAATGGGTTGATAA
GATTTATGAGCTTATGGATTCTGTTGATAGTTACATTCCTATCCCACAAA
GACAAACTGATTTGCCCTTTTTGTTAGCTGTTGAAGATGTGTTTTCAATT
ACTGGTCGTGG
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