EG358197

Overview
NameEG358197
Unique NameEG358197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358197 vs. ExPASy Swiss-Prot
Match: XPR1_MUSPA (Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus pahari GN=Xpr1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13
Identity = 61/222 (27.48%), Postives = 107/222 (48.20%), Query Frame = 3
Query:    3 YNPLLLVTMMVWLWGVNLWVFAQSNVNYVKIFDLD-QDHLTHREVWKCATWMTIIVPTSMTAYLYLYSHGEVSLAASQ--PVLLYIAVAMILIFPFDIFXXXXXXXXXXTLWRI-VLPLQAISFSDFFLVDILTSMAKVFSDLERSVCRMVHRQVATIAWFEADSV----------CGSHSVAI-PLVLVLPYLFRLFQCLRQYKDTREK-TALFNALKYST 620
            Y    L+   ++L G+N + + Q+ VN+V IF+L+ +++L+H+ +++ A ++ I+   S+ A  +      +S+      P+ LY  +   LI P   F           L+R+   P   + F+DF+L D L S++ +  DLE  +C         + W E+  +          C  ++  +  +V  +P   R  QCLR+Y+DTR     L NA KYST
Sbjct:  272 YRGGFLLIEFLFLLGINTYGWRQAGVNHVLIFELNPRNNLSHQHLFEIAGFLGILWCLSLLACFF----APISIIPIYVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSFE----LKWDESKGLLPNDPQGPEFCHKYTYGVRAIVQCIPAWLRFIQCLRRYRDTRRAFPHLVNAGKYST 485          
BLAST of EG358197 vs. ExPASy Swiss-Prot
Match: XPR1_HUMAN (Xenotropic and polytropic retrovirus receptor 1 OS=Homo sapiens GN=XPR1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13
Identity = 61/222 (27.48%), Postives = 107/222 (48.20%), Query Frame = 3
Query:    3 YNPLLLVTMMVWLWGVNLWVFAQSNVNYVKIFDLD-QDHLTHREVWKCATWMTIIVPTSMTAYLYLYSHGEVSLAASQ--PVLLYIAVAMILIFPFDIFXXXXXXXXXXTLWRI-VLPLQAISFSDFFLVDILTSMAKVFSDLERSVCRMVHRQVATIAWFEA----------DSVCGSHSVAI-PLVLVLPYLFRLFQCLRQYKDT-REKTALFNALKYST 620
            Y    L+   ++L G+N + + Q+ VN+V IF+L+ + +L+H+ +++ A ++ I+   S+ A  +      +S+  +   P+ LY  +   LI P   F           L+R+   P   + F+DF+L D L S++ +  DLE  +C         + W E+            +C  ++  +  +V  +P   R  QCLR+Y+DT R    L NA KYST
Sbjct:  272 YRGGFLLIEFLFLLGINTYGWRQAGVNHVLIFELNPRSNLSHQHLFEIAGFLGILWCLSLLACFF----APISVIPTYVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMIC----FYSLELKWDESKGLLPNNSEESGICHKYTYGVRAIVQCIPAWLRFIQCLRRYRDTKRAFPHLVNAGKYST 485          
BLAST of EG358197 vs. ExPASy Swiss-Prot
Match: XPR1_CRIGR (Xenotropic and polytropic retrovirus receptor 1 homolog OS=Cricetulus griseus GN=XPR1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.314e-13
Identity = 62/222 (27.93%), Postives = 107/222 (48.20%), Query Frame = 3
Query:    3 YNPLLLVTMMVWLWGVNLWVFAQSNVNYVKIFDLD-QDHLTHREVWKCATWMTIIVPTSMTAYLYLYSHGEVSLAASQ--PVLLYIAVAMILIFPFDIFXXXXXXXXXXTLWRI-VLPLQAISFSDFFLVDILTSMAKVFSDLERSVCRMVHRQVATIAWFEADSV----------CGSHSVAI-PLVLVLPYLFRLFQCLRQYKDT-REKTALFNALKYST 620
            Y    L+   ++L G+N + + Q+ VN+V IF+L+ +++L+H+ +++ A ++ I+   S+ A  +      +S+      P+ LY  +   LI P   F           L+R+   P   + F+DF+L D L S++ +  DLE  +C         + W E  S+          C  ++  +  +V  +P   R  QCLR+Y+DT R    L NA KYST
Sbjct:  272 YRGGFLLIEFLFLLGINTYGWRQAGVNHVLIFELNPRNNLSHQHLFEIAGFLGILWCLSLLACFF----APISVVPIYVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSFE----LKWDENKSLLPNDLQEPEFCHRYTYGVRAIVQCIPAWLRFIQCLRRYRDTKRAFPHLVNAGKYST 485          
BLAST of EG358197 vs. ExPASy Swiss-Prot
Match: XPR1_MUSMC (Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus musculus castaneus GN=Xpr1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13
Identity = 61/222 (27.48%), Postives = 106/222 (47.75%), Query Frame = 3
Query:    3 YNPLLLVTMMVWLWGVNLWVFAQSNVNYVKIFDLD-QDHLTHREVWKCATWMTIIVPTSMTAYLYLYSHGEVSLAASQ--PVLLYIAVAMILIFPFDIFXXXXXXXXXXTLWRI-VLPLQAISFSDFFLVDILTSMAKVFSDLERSVCRMVHRQVATIAWFEADSV----------CGSHSVAI-PLVLVLPYLFRLFQCLRQYKDTREK-TALFNALKYST 620
            Y    L+   ++L G+N + + Q+ VN+V IF+L+ +++L+H+ +++ A ++ I+   S+ A  +      +S+      P+ LY  +   LI P   F           L+R+   P   + F+DF+L   L S++ +  DLE  +C         + W E+  +          C  +S  +  +V  +P   R  QCLR+Y+DTR     L NA KYST
Sbjct:  272 YRGGFLLIEFLFLLGINTYGWRQAGVNHVLIFELNPRNNLSHQHLFEIAGFLGILWCLSLLACFF----APISIIPIYVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLAGQLNSLSVILMDLEYMICFYSFE----LKWDESKGLLPNDPQEPEFCHKYSYGVRAIVQCIPAWLRFIQCLRRYRDTRRAFPHLVNAGKYST 485          
BLAST of EG358197 vs. ExPASy Swiss-Prot
Match: PHO1_ARATH (Putative phosphate transporter 1 OS=Arabidopsis thaliana GN=PHO1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.353e-11
Identity = 54/211 (25.59%), Postives = 97/211 (45.97%), Query Frame = 3
Query:    3 YNPLLLVTMMVWLWGVNLWVFAQSNVNYVKIFDLDQDH-LTHREVWKCATWMTIIVPTSMTAYLYLYSHG-EVSLAASQPVLLYIAVAMILIFPFDIFXXXXXXXXXXTLWRIVL-PLQAISFSDFFLVDILTSMAKVFSDLERSVCRMVHRQVATIAWFEADSVCGSHSVAIPLVLVLPYLFRLFQCLRQYKDTREKTALFNALKYSTAV 626
            ++   L+++ ++++G NL+++  + +NY  IF+   +  L +R+ +   T     V  +M  +L L + G   S   + P +L +    +LI PF+ F           L +IV  P   +   DFF+ D LTS   +   LE + C  + +   T  +    +       A  L+  LPY +R  QC+R++ D      L N  KY +A+
Sbjct:  429 FSVFALLSLHMFMYGCNLYMWKNTRINYTFIFEFAPNTALRYRDAFLMGTTFMTSVVAAMVIHLILRASGFSASQVDTIPGILLLIFICVLICPFNTFYRPTRFCFIRILRKIVCSPFYKVLMVDFFMGDQLTSQIPLLRHLETTGCYFLAQSFKTHEYNTCKNGRYYREFAY-LISFLPYFWRAMQCVRRWWDESNPDHLINMGKYVSAM 638          
The following BLAST results are available for this feature:
BLAST of EG358197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
XPR1_MUSPA3.283e-1327.48Xenotropic and polytropic retrovirus receptor 1 ho... [more]
XPR1_HUMAN3.283e-1327.48Xenotropic and polytropic retrovirus receptor 1 OS... [more]
XPR1_CRIGR7.314e-1327.93Xenotropic and polytropic retrovirus receptor 1 ho... [more]
XPR1_MUSMC9.552e-1327.48Xenotropic and polytropic retrovirus receptor 1 ho... [more]
PHO1_ARATH2.353e-1125.59Putative phosphate transporter 1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank description9a11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl009a11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358197 ID=EG358197; Name=EG358197; organism=Citrus sinensis; type=EST; length=856bp
ACTATAATCCTCTTCTTCTTGTGACTATGATGGTGTGGCTTTGGGGAGTA
AATTTATGGGTTTTTGCGCAGTCTAATGTCAATTATGTAAAGATTTTTGA
TCTCGATCAAGATCATCTTACACACAGAGAAGTATGGAAGTGTGCCACAT
GGATGACTATCATTGTCCCAACAAGCATGACAGCATATCTATATCTTTAC
TCACATGGAGAAGTATCATTGGCGGCTTCACAACCAGTGCTTTTATATAT
AGCTGTTGCGATGATTTTGATATTCCCTTTTGATATTTTTTATCTGTCAT
CCCGATACTACTTGTTAAGGACACTTTGGCGGATAGTTCTTCCACTACAG
GCAATATCTTTTTCTGACTTCTTCTTGGTTGATATTTTGACCTCCATGGC
AAAGGTGTTTTCAGATTTGGAGCGTTCAGTCTGTCGTATGGTTCATCGAC
AGGTTGCCACTATTGCATGGTTTGAAGCTGATTCTGTTTGTGGAAGTCAC
TCCGTTGCAATCCCTTTAGTCCTAGTTTTGCCTTACCTTTTCCGTCTGTT
TCAATGTCTTCGACAATACAAGGATACAAGAGAGAAAACAGCCCTTTTTA
ATGCACTAAAATATTCGACTGCAGTACCTGCCCGGGCGGCCGCCCGGGCA
GGTACAATTTTCTCGGCCCATGCATGAAATTACATTTTCAACAGATGACA
AGCCCAAACTTCTCAGTCAGTTGACTGCCTTACTGGCTGATATTGGGCTG
AACATCCAAGAAGCACATGCATTTTCCACAGTTGATGGTTACTCCTTAGA
TGTCTTCGTGGTTGATGGTTGGCCATATGAGGAGACAGAGCAGCTTAGAG
CTGCAC
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