CX676117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676117 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.627e-18 Identity = 75/287 (26.13%), Postives = 129/287 (44.95%), Query Frame = 1 Query: 1 EIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYE----EYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSN------INE--IRNLSEDFRNTMED----YIAQLIKLAEKLSELMCENLGL---EKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPXKNGSRLSIATFYNPANDAIISPAIKLL 804 E+ + +ID G R + + +ACE+ GFF V NHGI+ L+E+ + +++ + E + E + W+ T + + + + E +R L + + + Y ++ +L+ +L E++ E+LG+ + Y + F ++ S+ ++ YP C P G H D + +L QD V GLE + +G W I P R + VN GD LSN RY+S LHR + R S+A F P D ++ P +L+ Sbjct: 43 ELEVALIDVGA--GAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFF--QRNDSI-MRLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVWAEGRWRAIRP-RPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELV 322
BLAST of CX676117 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.658e-17 Identity = 75/272 (27.57%), Postives = 131/272 (48.16%), Query Frame = 1 Query: 10 IPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNS----HYEEYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINE----IRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQ---CPYPELVRGLREHTDAGGIILLLQDDQVPGLEF-FKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPXKNGSRLSIATFYNPANDAIISP 789 IPVID + + + + + +ACE++GFF+V NHG+ L+ +++Q + H+ K G D ++ N D+ W + ++ R+ FR +E+YI ++ +++ K E++ E L +E + K ++ YP+ P E + G EHTD +I LL+ + GL+ KDG WV + P +++ FV GD ++V++NGR++S HRV+ SR+S+ F P I+P Sbjct: 27 IPVIDLTDSDAKTQ------IVKACEEFGFFKVINHGVRPDLLTQLEQEAINFFALHHSLKDKAGPPDP-FGYGTKRIGPNG--DLGWLEYILLNANLCLESHKTTAIFRHTPAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEI-GFGEHTDPQ-LISLLRSNDTEGLQICVKDGTWVDVTPD-HSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAP 286
BLAST of CX676117 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.283e-16 Identity = 69/280 (24.64%), Postives = 115/280 (41.07%), Query Frame = 1 Query: 10 IPVIDFNEL-----EGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYL--KGGFYDSELVKSLEKENK----NNIRDVDWESTFFIWHRPSSNINEIR--NLSEDFRNTMEDYIAQLIKLAEKLSELMCENL-------GLEKSYIKNAF--SGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPXKNGSRLSIATFYNPANDAII 783 IPV+D + + + R + + + A WG + HGI +LM++++ + + + K + + L+ N +WE F P + D+ D+ + LA L ++ L LEK+ + + + K+ YP+CP PEL G+ HTD + +L + VPGL+ WV TI V+ GD +E+LSNGRY S LHR + + R+S F P D+++ Sbjct: 58 IPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILHNG-VPGLQVLHGARWVTAR-HEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVL 335
BLAST of CX676117 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.467e-13 Identity = 75/292 (25.68%), Postives = 137/292 (46.92%), Query Frame = 1 Query: 4 IPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQ----LVNSHYEEYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINE-IRNLSED----FRNTMEDYIAQLIKLAEKLSELMCENLGL-EKSYIKNAFSGEKGPSVGTKVAKYPQCPY-------PELVR-------GLREHTDAGGIILLLQDDQVPGLEFFKD-GEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPXKNGSRLSIATFYNPANDAIISPAIKLL 804 + IP ID + LE R + L+ +ACE++GFF+V NH + K+++ ++ + + + E + G + + N + E + + H +I+E + +++D F + DYI + L ++ EL E L + +KS + E S+ ++ YP P ++ G EH+D I+ +L+ + V GL+ G W+ +PP + +V GD ++VL+NGR+ S HRV+ R+S+ F P + +ISP K++ Sbjct: 18 VGIPTIDLS-LE---RSQLSELVVKACEEYGFFKVVNHSVPKEVISRLDEEGIEFFSKNSSEKRQAGT-STPFGYGCKNIGPNGDKG---ELEYLLLHSNPISISERSKTIAKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSL-LRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQ-ILTILRSNNVGGLQISTHHGLWIPVPPDPSE-FYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMV 298 The following BLAST results are available for this feature:
BLAST of CX676117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676117 ID=CX676117; Name=CX676117; organism=Citrus sinensis; type=EST; length=842bpback to top |