CX676115

Overview
NameCX676115
Unique NameCX676115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.507e-71
Identity = 140/199 (70.35%), Postives = 161/199 (80.90%), Query Frame = -2
Query:  260 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 853
            S+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L  +L  KAK+KGV LLLP+DV++A++F+ DA SKV    AI   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL DA
Sbjct:  204 SSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEAKAKNKGVELLLPSDVLLANEFSPDAESKVSQIDAISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALKDA 402          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.473e-69
Identity = 136/198 (68.69%), Postives = 160/198 (80.81%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L  +L EKAK+KGV LLLP+DVV+A++F+  A SKV    +I   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT +IA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL++
Sbjct:  204 SSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEEKAKTKGVELLLPSDVVLANEFSPTAESKVSQIDSISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNSIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKNLPGVAALNE 401          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.304e-65
Identity = 117/198 (59.09%), Postives = 152/198 (76.77%), Query Frame = -2
Query:  260 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 853
            S KI V+E+LL KVD +L+GG M+FTF+KAQG+++G SLVE+DKL+L  S++EKAK+ GV  LLPTDVV+ADKF  DAN+K+    +I D WMGLD+GP+    F E +   KT+IWNGPMGVFE +KFA GT A+A+ LA+ + +G  T+IGGGDS AA+   GL D ++H+STGGGASLE LEGK LPG+ AL +A
Sbjct:  200 SGKIDVLENLLGKVDTVLVGGAMVFTFFKAQGYNIGKSLVEDDKLELAKSILEKAKTSGVKFLLPTDVVLADKFDQDANTKIATIDSIEDDWMGLDIGPETANCFREEVVNAKTVIWNGPMGVFEMEKFAKGTMAVAQALADATKQGAITVIGGGDSAAAIAVAGLEDSVTHVSTGGGASLEFLEGKELPGIAALSNA 397          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.233e-65
Identity = 121/195 (62.05%), Postives = 151/195 (77.44%), Query Frame = -2
Query:  263 KIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 847
            KI VIE+LL KVD L++GGGM  TF KAQG+ +G+SL E+DKLDL  +LME+AK +GV LL+P DVV+AD+FAADA  +VV   AIP+GWM LD+GP  ++ +   +  +KT++WNGPMGVFE D FA GT  +AK +A  SG   TTIIGGGDSVAAVEK G+A++M+HISTGGGASLE +EGK LPGV  L D
Sbjct:  201 KIAVIENLLTKVDHLIIGGGMANTFLKAQGYGIGASLCEDDKLDLARTLMEQAKERGVQLLMPVDVVVADRFAADAEKQVVAIDAIPEGWMALDIGPKTVEQYHSVIVDSKTVVWNGPMGVFEMDAFAGGTIGVAKAMAACSG---TTIIGGGDSVAAVEKAGVAEQMTHISTGGGASLEFMEGKELPGVAVLAD 392          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_DEIRA (Phosphoglycerate kinase OS=Deinococcus radiodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.075e-64
Identity = 124/195 (63.59%), Postives = 153/195 (78.46%), Query Frame = -2
Query:  269 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 853
            S KI VIE+LL KVD +L+GGGM+FTF KA+G  +G+SLVE+D+LDL   L+EK   K   LLLPTD V ADKFAADA SKVVPA  IPDGWMGLD+GPD  +++++AL   KT+ WNGPMGVFEFD+FAAGT A+A  +  L  +   T++GGGDSV+A+ K G AD++ HISTGGGASLELLEGK LPGV+A+
Sbjct:  220 SDKIKVIENLLPKVDRMLIGGGMMFTFIKARGGQIGNSLVEDDQLDLAKGLLEKYGDK---LLLPTDAVAADKFAADAQSKVVPADQIPDGWMGLDIGPDTQRAYADALQGAKTVFWNGPMGVFEFDQFAAGTNAVAAAVGSLKDQAY-TVVGGGDSVSAINKSGKADQIDHISTGGGASLELLEGKELPGVVAM 410          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.834e-64
Identity = 118/195 (60.51%), Postives = 151/195 (77.44%), Query Frame = -2
Query:  263 KIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 847
            KIGVIESLLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S M++AK KGV+  +PTDV++AD F+ DAN+K+VP + IP  W  LD+G +  K++++ +  +K ++WNGPMGVFE D FA GT A+A+ LAE       ++IGGGDS AAVEK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  201 KIGVIESLLEKVDNLIIGGGLAYTFVKALGHEVGKSLLEEDKIELAKSFMDRAKEKGVNFYMPTDVLVADDFSNDANTKIVPVSEIPSDWEALDIGEETRKTYADVIKNSKLVVWNGPMGVFEIDAFAKGTRAVAEALAE--ANDTYSVIGGGDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVKALND 393          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.086e-64
Identity = 124/198 (62.63%), Postives = 151/198 (76.26%), Query Frame = -2
Query:  260 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 853
            S KIGVIE+LL KVD LL+GGGM  TF  AQGH +G SLVE D   +  SL+++A  +GV L+LPTDVVIAD F+ADAN KVVP   IP GW  LD+GP+ I++++E +   +T+IWNGPMGVFE   FA GT AIA+ +A   G    TIIGGGDSVAA+E++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  201 SDKIGVIENLLGKVDALLIGGGMANTFLLAQGHEMGDSLVEPDSAPIAKSLLDQAAQRGVRLMLPTDVVIADAFSADANRKVVPVGEIPPGWRALDIGPETIRAYTEVITGAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPG---MTIIGGGDSVAAIEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_BACST (Phosphoglycerate kinase OS=Bacillus stearothermophilus GN=pgk PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 4.086e-64
Identity = 121/195 (62.05%), Postives = 149/195 (76.41%), Query Frame = -2
Query:  263 KIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 847
            KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S MEKAK KGV   +P DVV+AD+FA DAN+KVVP  AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE D FA GT+AIA+ LAE       ++IGGGDS AAVEK GLADKM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  201 KIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAE--ALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALED 393          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.970e-64
Identity = 119/197 (60.41%), Postives = 156/197 (79.19%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S KI V+ESL EKVD +L+GG M+FTF+KAQG  VG+SLVEE+KL+L  SL+EKAK+K V LLLP DVV+A + +ADA S+V P +AI  G +GLD+GP  I+++ + +   KT++WNGPMGVFE D+FA GT A+A+ LA+ + +G  TIIGGGDS AA+ K GL+DK++H+STGGGASLE LEGK LPG+ AL+D
Sbjct:  201 SGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLVEENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPATIETYRKEILDAKTVLWNGPMGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CHLAD (Phosphoglycerate kinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pgk PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.518e-63
Identity = 121/198 (61.11%), Postives = 150/198 (75.76%), Query Frame = -2
Query:  260 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 853
            S KIGVIE+LL KVD LL+GGGM  TF  A+G ++G SLVE + + +   LM KA+ +G  LLLP DVVIAD F+A+A  +VV  TAIP GW  LD+GP  I+ +S  + + +T+IWNGPMGVFE + FAAGT AIA+ +AE S  G  TI+GGGDSVAAVE+ GLA+KM+H+STGGGASLELLEG+ LPGV AL DA
Sbjct:  202 SDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNLGDSLVEPESVPVAQQLMAKAEERGARLLLPVDVVIADAFSAEAQRQVVEVTAIPSGWRVLDIGPKTIELYSAEIRSARTVIWNGPMGVFELEPFAAGTRAIAQAMAEASANGAITIVGGGDSVAAVEQAGLAEKMAHVSTGGGASLELLEGRVLPGVAALQDA 399          
The following BLAST results are available for this feature:
BLAST of CX676115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMP4.507e-7170.35Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM52.473e-6968.69Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_CHLT36.304e-6559.09Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_BREBN8.233e-6562.05Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_DEIRA1.075e-6463.59Phosphoglycerate kinase OS=Deinococcus radiodurans... [more]
PGK_BACLD1.834e-6460.51Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]
PGK_ROSCS4.086e-6462.63Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]
PGK_BACST4.086e-6462.05Phosphoglycerate kinase OS=Bacillus stearothermoph... [more]
PGK_CHLTE6.970e-6460.41Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_CHLAD4.518e-6361.11Phosphoglycerate kinase OS=Chloroflexus aggregans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_67C03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-67C03-E5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676115 ID=CX676115; Name=CX676115; organism=Citrus sinensis; type=EST; length=854bp
TTTGATCAGAAAGGAACAAGAACTTGACTTCAGGAAACTTATAGCCTTAC
CATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAATGCATCACCATT
GATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACC
AACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGC
CACACATACAACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAA
CTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCT
CAAGGAGCTCTAAGCTGGCTCCACCTCCGGTGGAGATATGGCTCATCTTG
TCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAAT
GATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTG
CCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCA
TTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGAT
GGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTG
CTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACA
ACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCAT
AAGTGACGTACCGAGATCAAGCTTGTCTTCCTCAACAAGGGATGAACCAA
CAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTCCTCCACCGAGC
AATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACACCGATCTTAGT
TGAC
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