CX676115

Overview
NameCX676115
Unique NameCX676115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_DEIDV (Phosphoglycerate kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.580e-60
Identity = 116/195 (59.49%), Postives = 150/195 (76.92%), Query Frame = -2
Query:  269 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 853
            S KI VIE+LL KVD +L+GGGM+FTF KA+G  +G+SLVE+D++D    L+E+   K   L+LPTD V AD+FAADA+++VVPA  IP+GWMGLD+GPD  ++++EAL   KT+ WNGPMGVFEF  FAAGT A+A  +  L  +   T++GGGDSV+A+ K G AD++ HISTGGGASLELLEGK LPGV A+
Sbjct:  198 SDKIKVIENLLPKVDRMLIGGGMMFTFIKARGGVIGNSLVEDDQVDYARGLLEQFGDK---LMLPTDAVAADRFAADADTRVVPADQIPEGWMGLDIGPDTQQAYTEALRGAKTVFWNGPMGVFEFPAFAAGTNAVAAAVGSLKNQAY-TVVGGGDSVSAINKSGKADQIDHISTGGGASLELLEGKALPGVEAM 388          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CLONN (Phosphoglycerate kinase OS=Clostridium novyi (strain NT) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.106e-60
Identity = 113/197 (57.36%), Postives = 146/197 (74.11%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S KI VI +LLEKVD L++GGGM +TF KAQG+++G SLVEEDK++    +M+KAK+KGV LLLP D V+ ++F A+          IP+G+MGLD+GP     +++A+ T KT++WNGPMGVFEF  FA GT A+A+ +AE      TTIIGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL D
Sbjct:  204 SDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTIGKSLVEEDKVEYAKEMMDKAKAKGVKLLLPVDNVVGEEFDANTTPVTTEDANIPEGYMGLDIGPKTSALYADAVRTAKTVVWNGPMGVFEFANFAKGTIAVAEAMAEAD---ATTIIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALSD 397          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CLOD6 (Phosphoglycerate kinase OS=Clostridium difficile (strain 630) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.106e-60
Identity = 113/197 (57.36%), Postives = 149/197 (75.63%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S K+ VI  LLEKVD L++GGGM +TF KAQG+ VG+SL+E DK++    +MEKAK+KGV+LLLP DVV+AD FA DA   V     + + +MGLD+GP  I +F + +  +KT++WNGPMGVFEF+ FA GT ++A+ +AEL+    TT+IGGGDS AAV ++G  DKM+H+STGGGASLE LEGK LPG+ ALD+
Sbjct:  205 SDKLAVINELLEKVDNLIIGGGMAYTFLKAQGYEVGTSLLEIDKVEYAKEMMEKAKNKGVNLLLPVDVVMADHFAPDATPIVTEDANVKEDYMGLDMGPKTIANFVKTIKESKTVVWNGPMGVFEFENFANGTLSVARAMAELT--DATTVIGGGDSAAAVNQLGFGDKMTHVSTGGGASLEFLEGKELPGIAALDN 399          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CHLPB (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.106e-60
Identity = 112/197 (56.85%), Postives = 146/197 (74.11%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S KI V+E+L  KVD +L+GG MIFTF+KAQG SVG SLVE+DK++L   L++ AK + +++LLP DV+ A +F+ DA +  VP   IP+  MGLD+GP  I +FS  +   KT++WNGPMGVFE + FA GT AIA+ LA+ + KG  +I+GGGDS AAV K GLA  ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  201 SGKIDVLENLFNKVDTVLIGGAMIFTFFKAQGLSVGKSLVEDDKVELARHLLQTAKERKINMLLPEDVIAASEFSGDAETMAVPVGGIPENMMGLDIGPKTIDTFSREILAAKTVVWNGPMGVFEIEPFAKGTIAIAQALADATAKGTISIVGGGDSAAAVMKAGLASGITHISTGGGASLEFLEGKELPGITALND 397          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CHLCH (Phosphoglycerate kinase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.106e-60
Identity = 107/197 (54.31%), Postives = 150/197 (76.14%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S KI V+E+L +KVD +L+GG M+FTF+KAQG+ VG SLVEE K++L  S++E+AK+KG+ LLLPTDVV+  + +ADA S V     +P+  +G+D+GP+   ++   +   +T++WNGPMGVFE D FA GT A+A+ LA+ + +G TTI+GGGDS AA+ K GLA +++HISTGGGASLE LEGK LPG+ AL++
Sbjct:  201 SGKIDVLENLFKKVDTVLIGGAMVFTFFKAQGYEVGKSLVEESKIELALSILEQAKAKGIKLLLPTDVVVTAEISADAESSVASIADMPNNLIGVDIGPETAAAYRNEIIGARTVLWNGPMGVFELDNFATGTIAVAQALADATAQGATTIVGGGDSAAAIAKAGLASEITHISTGGGASLEFLEGKELPGIAALNN 397          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CLOAB (Phosphoglycerate kinase OS=Clostridium acetobutylicum GN=pgk PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.974e-60
Identity = 110/197 (55.84%), Postives = 148/197 (75.13%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S KI VI +LLEKVD L++GGGM +TF KAQG+++G+SL+E DK+D    ++EKA++KGV LLLP D ++  +F AD  +       IP+G+MGLD+GP   K +++A+   KT++WNGPMGVFEF+ FA GT+ +AK +AE      TT+IGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL+D
Sbjct:  203 SDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTIGTSLLEADKVDYAKEMIEKAEAKGVKLLLPIDNIVGAEFKADTKAVTTEDANIPEGYMGLDIGPKTQKLYADAVKEAKTVVWNGPMGVFEFENFAKGTKDVAKAMAE---SDATTVIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALND 396          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_PELPB (Phosphoglycerate kinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.041e-59
Identity = 108/197 (54.82%), Postives = 152/197 (77.16%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S KI V+E+L +KVD +L+GG M+FTF+KAQG+ +G+SLVEE K++L   ++++AK+KG+ LLLP DV++A + +A A+      TAIP+  +G+D+GP   + +   + + +T++WNGPMGVFE D FAAGT A+A+ +AE + +G TTIIGGGDS AAV K GLA++M+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  201 SGKIDVLENLFKKVDTVLIGGAMVFTFFKAQGYEIGNSLVEESKIELALKILDEAKNKGIKLLLPVDVIVAPEISATADCHSEMITAIPEEMIGVDIGPLTAEIYRNEILSARTVLWNGPMGVFEIDNFAAGTMAVAQAMAEATAEGATTIIGGGDSAAAVAKAGLANEMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_DEIGD (Phosphoglycerate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.360e-59
Identity = 115/195 (58.97%), Postives = 150/195 (76.92%), Query Frame = -2
Query:  269 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 853
            S KI VIE+LL +VD +L+GGGM+FTF +A+G  +G+SLVEED++     L+E+    G  L+LPTD V AD+FA DA ++VVPA  IPDGWMGLD+GP+  ++++EAL   KT+ WNGPMGVFEF  FAAGT A+A+ +AEL G    T++GGGDSV+A+ + G A K+SHISTGGGASLELLEG+ LPGV A+
Sbjct:  198 SDKIKVIENLLPRVDRMLIGGGMMFTFIRARGGQIGNSLVEEDQVAYARQLLEQY---GDRLMLPTDAVAADRFAPDAQTRVVPADRIPDGWMGLDIGPETARAYAEALQGAKTVFWNGPMGVFEFPAFAAGTNAVAQAVAEL-GNQAYTVVGGGDSVSAINQSGQASKVSHISTGGGASLELLEGQLLPGVEAM 388          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CLOBL (Phosphoglycerate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.320e-59
Identity = 114/197 (57.87%), Postives = 147/197 (74.62%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  204 SDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX676115 vs. ExPASy Swiss-Prot
Match: PGK_CLOBK (Phosphoglycerate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.320e-59
Identity = 114/197 (57.87%), Postives = 147/197 (74.62%), Query Frame = -2
Query:  263 STKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 853
            S KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVFEF  FA GT  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  204 SDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397          
The following BLAST results are available for this feature:
BLAST of CX676115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_DEIDV3.580e-6059.49Phosphoglycerate kinase OS=Deinococcus deserti (st... [more]
PGK_CLONN6.106e-6057.36Phosphoglycerate kinase OS=Clostridium novyi (stra... [more]
PGK_CLOD66.106e-6057.36Phosphoglycerate kinase OS=Clostridium difficile (... [more]
PGK_CHLPB6.106e-6056.85Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_CHLCH6.106e-6054.31Phosphoglycerate kinase OS=Chlorobium chlorochroma... [more]
PGK_CLOAB7.974e-6055.84Phosphoglycerate kinase OS=Clostridium acetobutyli... [more]
PGK_PELPB1.041e-5954.82Phosphoglycerate kinase OS=Pelodictyon phaeoclathr... [more]
PGK_DEIGD1.360e-5958.97Phosphoglycerate kinase OS=Deinococcus geothermali... [more]
PGK_CLOBL2.320e-5957.87Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBK2.320e-5957.87Phosphoglycerate kinase OS=Clostridium botulinum (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_67C03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-67C03-E5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676115 ID=CX676115; Name=CX676115; organism=Citrus sinensis; type=EST; length=854bp
TTTGATCAGAAAGGAACAAGAACTTGACTTCAGGAAACTTATAGCCTTAC
CATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAATGCATCACCATT
GATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCATCTACAAAACC
AACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGC
CACACATACAACTCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAA
CTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCT
CAAGGAGCTCTAAGCTGGCTCCACCTCCGGTGGAGATATGGCTCATCTTG
TCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAAT
GATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTG
CCTCAGTGCCAGCAGCAAATTTATCAAATTCAAACACACCCATAGGTCCA
TTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTGAATGACTTGAT
GGCATCAGGTCCAACATCCAAGCCCATCCAACCATCTGGAATTGCCGTTG
CTGGCACCACCTTGCTGTTGGCATCAGCAGCAAACTTGTCAGCAATAACA
ACATCAGTAGGGAGCAGAAGAGACACCCCTTTAGATTTGGCCTTCTCCAT
AAGTGACGTACCGAGATCAAGCTTGTCTTCCTCAACAAGGGATGAACCAA
CAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGATCATTCCTCCACCGAGC
AATAGAATGTCAACCTTCTCCAAAAGTGATTCAATAACACCGATCTTAGT
TGAC
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