CX676106

Overview
NameCX676106
Unique NameCX676106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 6.269e-15
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = -1
Query:  284 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEH---DAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYE 613
            PCT+ + +T + N   V+ A  A    I  SW  C+D +L +H      SM+  ++ L   G R  +FSGD D  VP T +     ++    V  W PW    +VAG+ Q Y+
Sbjct:  169 PCTE-QYSTKYYNLPEVQKAFRANVTGIPYSWTACSD-VLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVAGWCQVYK 279          

HSP 2 Score: 40.4318 bits (93), Expect = 6.269e-15
Identity = 17/38 (44.74%), Postives = 27/38 (71.05%), Query Frame = -3
Query:  159 ILTIKGAGHTVPEYKPREALDFYSRFLAGKPL*KGAMS 272
            ++TI+GAGH VP ++P++AL  +  FL  KP+ + A S
Sbjct:  283 LVTIRGAGHEVPLHRPQQALKLFEHFLQDKPMPRPAHS 320          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 8.060e-15
Identity = 38/119 (31.93%), Postives = 62/119 (52.10%), Query Frame = -1
Query:  281 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDA---GSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPW-----TSNGQVAGYTQGYEN 613
            PCT+   A+ +LND  VR A+H  PE +   W+LC   +  ++         +Y K L+ + YR L+++GD DM   F G E +  S+  K+  + RPW      S  Q+AG+ + + +
Sbjct:  329 PCTNTTAASNYLNDPHVRKALHI-PEQLP-RWDLCNFLVNIQYRRLYQSMCSQYLKLLSAQKYRILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQIAGFVKEFSH 445          

HSP 2 Score: 40.4318 bits (93), Expect = 8.060e-15
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = -3
Query:  180 LTIKGAGHTVPEYKPREALDFYSRFLAGKP 269
            LTIKGAGH VP  KP+ AL  +SRFL  +P
Sbjct:  449 LTIKGAGHMVPTDKPQAALTMFSRFLNRQP 478          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 8.063e-15
Identity = 35/117 (29.91%), Postives = 55/117 (47.01%), Query Frame = -1
Query:  269 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTF 613
            PCT+ R A ++ N   V+ A+HA    I   W  C++ +   +     +++  ++ +   G R  +FSGD D  VP T +      +       W PW    QV G+T+ YE  LTF
Sbjct:  325 PCTE-RYAEIYYNRPDVQKALHANTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVGGWTEVYE-GLTF 439          

HSP 2 Score: 43.1282 bits (100), Expect = 8.063e-15
Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = -3
Query:  171 LTIKGAGHTVPEYKPREALDFYSRFLAGKPL*K 269
            +T++GAGH VP +KPR A + +  FL GKPL K
Sbjct:  440 VTVRGAGHEVPLFKPRAAFELFKYFLRGKPLPK 472          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.769e-14
Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = -1
Query:  269 IVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGS---MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTF 655
            I  S P  L     PC DD  A ++ N A V+ ++HA       +W +C   I F +  GS   ++  ++ L   G R  ++SGD D  VP   +     ++   I   WRPW    QV+G+ Q YE  LTF
Sbjct:  302 IYTSMPPRLMGGYDPCLDD-YARVFYNRADVQKSLHASDGVNLKNWSICNMEI-FNNWTGSNPSVLPIYEKLIAGGLRIWVYSGDTDGRVPVLATRYSLNALELPIKTAWRPWYHEKQVSGWLQEYE-GLTF 430          

HSP 2 Score: 38.891 bits (89), Expect = 1.769e-14
Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = -3
Query:  180 TIKGAGHTVPEYKPREALDFYSRFLAGKP 266
            T +GAGH VP +KP  +L F+S FL+G P
Sbjct:  432 TFRGAGHAVPCFKPSSSLAFFSAFLSGVP 460          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.434e-13
Identity = 39/116 (33.62%), Postives = 55/116 (47.41%), Query Frame = -1
Query:  269 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGS-MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTF 613
            PCT+   A  + N   V+ A+HA   ++   +  C+  I    DA S MI   + L   G R  I+SGD D  VP T +    + +G K+   WR W    QVAG+ + Y   L F
Sbjct:  330 PCTES-YAENYFNRKDVQVALHANVTNLPYPYSPCSGVIKRWSDAPSTMIPIIQKLLTGGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKVESPWRSWFHKSQVAGWVETYAGGLNF 444          

HSP 2 Score: 35.4242 bits (80), Expect = 1.434e-13
Identity = 13/33 (39.39%), Postives = 22/33 (66.67%), Query Frame = -3
Query:  177 HILTIKGAGHTVPEYKPREALDFYSRFLAGKPL 275
            + +T++GAGH VP   P ++L  +S F++  PL
Sbjct:  443 NFVTVRGAGHQVPALAPAQSLTLFSHFISSVPL 475          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.426e-13
Identity = 33/113 (29.20%), Postives = 55/113 (48.67%), Query Frame = -1
Query:  284 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPW-TSNGQVAGYTQGYE 613
            PCT+   + ++ N   V+ A+H  P      WE C++ I   ++    S++  +  L   G R  +FSGD D  +P T +     ++    V  W  W   +G+V G+TQGY+
Sbjct:  280 PCTEKH-SIVYFNLHEVQKALHVNPVIGKSKWETCSEVINTNWKDCERSVLHIYHELIQYGLRIWMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVGGWTQGYK 391          

HSP 2 Score: 40.817 bits (94), Expect = 2.426e-13
Identity = 15/33 (45.45%), Postives = 25/33 (75.76%), Query Frame = -3
Query:  177 HILTIKGAGHTVPEYKPREALDFYSRFLAGKPL 275
            + +T++GAGH VP ++P++AL     FLAG+P+
Sbjct:  394 NFVTVRGAGHEVPLHRPKQALTLIKSFLAGRPM 426          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 4.083e-13
Identity = 36/115 (31.30%), Postives = 60/115 (52.17%), Query Frame = -1
Query:  293 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDA---GSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPW-----TSNGQVAGYTQ 613
            PCT+    + +LN+  VR A+H  PES+   W++C   +  ++         +Y K L+ + Y+ L+++GD DM   F G E +  S+  K+  + RPW      S  QVAG+ +
Sbjct:  324 PCTNTTAPSNYLNNPYVRKALHI-PESLP-RWDMCNFLVNLQYRRLYQSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQVAGFVK 436          

HSP 2 Score: 40.4318 bits (93), Expect = 4.083e-13
Identity = 19/30 (63.33%), Postives = 21/30 (70.00%), Query Frame = -3
Query:  180 LTIKGAGHTVPEYKPREALDFYSRFLAGKP 269
            LTIKGAGH VP  KPR A   +SRFL  +P
Sbjct:  444 LTIKGAGHMVPTDKPRAAFTMFSRFLNKEP 473          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 4.287e-12
Identity = 34/119 (28.57%), Postives = 62/119 (52.10%), Query Frame = -1
Query:  281 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDA---GSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPW-----TSNGQVAGYTQGYEN 613
            PCT+   A+ +LN+  VR A++  PE +   W++C   +  ++         +Y K L+ + Y+ L+++GD DM   F G E +  S+  K+  + RPW      S  Q+AG+ + + +
Sbjct:  330 PCTNTTAASTYLNNPYVRKALNI-PEQLP-QWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSH 446          

HSP 2 Score: 37.7354 bits (86), Expect = 4.287e-12
Identity = 18/30 (60.00%), Postives = 20/30 (66.67%), Query Frame = -3
Query:  180 LTIKGAGHTVPEYKPREALDFYSRFLAGKP 269
            LTIKGAGH VP  KP  A   +SRFL  +P
Sbjct:  450 LTIKGAGHMVPTDKPLAAFTMFSRFLNKQP 479          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.667e-11
Identity = 40/144 (27.78%), Postives = 64/144 (44.44%), Query Frame = -1
Query:  269 IVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGS--WELCTDRILFE---------HDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTR----SVGYKIVDKWRPWTSNGQVAGYTQGYENNLTF 655
            +V   PQ +      C +D     +LN   V+ A+HA    + G+  W +C+D + +E         +  GS++K        G    ++SGD D  +P TGS    +     +G +    +R W +  QV G+TQ Y N L F
Sbjct:  298 VVSPQPQQVGETVDVCLEDETVN-YLNRRDVQKALHAR---LVGTRKWTVCSDVLDYEVLDVEVPTINIVGSLVK-------AGVPVFVYSGDQDSVIPLTGSRTLVKRLAEELGLRTTVPYRVWFAGQQVGGWTQVYGNTLAF 430          

HSP 2 Score: 33.8834 bits (76), Expect = 2.667e-11
Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = -3
Query:  177 TIKGAGHTVPEYKPREALDFYSRFLAGKPL 266
            T++GA H VP  +P  AL  +  FL G+PL
Sbjct:  432 TVRGAAHEVPFSQPARALVLFKAFLGGRPL 461          
BLAST of CX676106 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 3.454e-11
Identity = 33/120 (27.50%), Postives = 55/120 (45.83%), Query Frame = -1
Query:  269 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHD----AGSMIKYHKNLTLRGY-RALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTF 613
            PC    +A  +LN   V+ ++H     +  +W LC +   F  +    + SM+   K L      R  +++GD D  +P T +    + +    V  W PW S GQV G+T+ Y+ N  +
Sbjct:  350 PCGMQYIAA-YLNREDVQRSMHVT--KLPHTWMLCNEATGFNWNQTDYSASMLPILKELMKHDQLRVWVYTGDTDTVIPLTVTMHALKMMNLTAVTDWLPWFSEGQVGGFTEEYKGNFRY 466          

HSP 2 Score: 36.965 bits (84), Expect = 3.454e-11
Identity = 15/30 (50.00%), Postives = 19/30 (63.33%), Query Frame = -3
Query:  177 TIKGAGHTVPEYKPREALDFYSRFLAGKPL 266
            T+ GAGH VP YKP+ AL  +  F+   PL
Sbjct:  468 TVIGAGHEVPLYKPKAALTLFKHFIRNSPL 497          
The following BLAST results are available for this feature:
BLAST of CX676106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CBP21_HORVU6.269e-1532.74Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
PPGB_BOVIN8.060e-1531.93Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
SCP25_ARATH8.063e-1529.91Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP31_ARATH1.769e-1432.58Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP35_ARATH1.434e-1333.62Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
CBP22_HORVU2.426e-1329.20Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
PPGB_MOUSE4.083e-1331.30Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
PPGB_HUMAN4.287e-1228.57Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
SCP46_ARATH2.667e-1127.78Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]
SCP39_ARATH3.454e-1127.50Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_67B07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-67B07-C13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676106 ID=CX676106; Name=CX676106; organism=Citrus sinensis; type=EST; length=658bp
TGTTCTCCCACTAGCTTTATTCATTGAATCATTCTAATCTTAATATAAAT
TATTGATGTCTCTCATATTCTTTCAGACACAGATTTTGATGAAGCAAAAG
GATGAGTGTAGCAAGACTGCTCTCTTTCTCAATCAAGCATAATGCACACA
AGATCCCAGCTCATAGCACCCTTTTACAGTGGTTTCCCGGCCAGAAAACG
ACTGTAAAAATCCAATGCCTCTCGTGGTTTGTATTCTGGTACTGTATGAC
CAGCTCCCTTTATGGTTAAAATGTGAGGTTGTTTTCATATCCTTGAGTAT
ATCCAGCAACTTGTCCATTGGAAGTCCAAGGTCTCCATTTATCTACAATC
TTATATCCAACCGACCTAGTCCATGCTTCACTCCCAGTGAAAGGAACACA
CATATCATGATCCCCACTGAATATGAGTGCCCGATATCCCCTGAGAGTGA
GGTTCTTATGGTATTTGATCATGCTCCCAGCATCATGTTCAAATAAAATC
CTGTCTGTACATAATTCCCAACTTCCAGCAATGCTCTCCGGTTCGGCATG
AATTGCTGTCCTAACTGCTGCATCATTGAGCCATAGAGTTGCAACTCTAT
CATCTGTGCATGGCACAGAATTACTATTGAGAAGCTGGGGCCAACTTGGA
ACAATCCC
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