CN189212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA4_PEA (Glutamine synthetase root isozyme B OS=Pisum sativum GN=GS3B PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 4.282e-66 Identity = 119/133 (89.47%), Postives = 127/133 (95.49%), Query Frame = -3 Query: 225 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 623 RITEI+GVV+SFDPKPI GDWNGAGAHAN+STKSMR +GG +VIKKAIEKLG RH EHIAAYGEGNERRLTG+HETADIN FSWGVANRG+SIRVGRDTEK+GKGYFEDRRPASNMDPYVVTSMIAETTILWK Sbjct: 223 RITEISGVVVSFDPKPIPGDWNGAGAHANFSTKSMRENGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINVFSWGVANRGSSIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTILWK 355
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA_LACSA (Glutamine synthetase OS=Lactuca sativa PE=2 SV=2) HSP 1 Score: 249.98 bits (637), Expect = 7.304e-66 Identity = 120/132 (90.91%), Postives = 124/132 (93.94%), Query Frame = -3 Query: 228 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW 623 RITEI GVV+SFDPKPI GDWNGAGAH NYSTK+MR +GG +VIKKAIEKLG RH EHIAAYGEGNERRLTGRHETADINTF WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW Sbjct: 223 RITEIYGVVVSFDPKPIPGDWNGAGAHTNYSTKTMREEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW 354
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLN14_ARATH (Glutamine synthetase cytosolic isozyme 1-4 OS=Arabidopsis thaliana GN=GLN1-4 PE=1 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 9.540e-66 Identity = 119/134 (88.81%), Postives = 124/134 (92.54%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITE+AGVVLS DPKPI GDWNGAGAH NYSTKSMR DGG +VIKKAIEKLG RH EHIAAYGEGNERRLTG+HETADINTF WGVANRGASIRVGRDTE+ GKGYFEDRRPASNMDPY VTSMIAE+TILWKP Sbjct: 223 RITELAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINTFLWGVANRGASIRVGRDTEQAGKGYFEDRRPASNMDPYTVTSMIAESTILWKP 356
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA1_MAIZE (Glutamine synthetase root isozyme 1 OS=Zea mays GN=GLN6 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.627e-65 Identity = 118/132 (89.39%), Postives = 123/132 (93.18%), Query Frame = -3 Query: 228 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILW 623 RITE+AG+VLS DPKPIKGDWNGAGAH NYSTKSMR GG +VIK AI+KLGKRH EHIAAYGEGNERRLTGRHETADINTF WGVANRGASIRVGRDTE+EGKGYFEDRRPASNMDPYVVT MIAETTILW Sbjct: 223 RITEMAGIVLSLDPKPIKGDWNGAGAHTNYSTKSMREAGGYEVIKAAIDKLGKRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEREGKGYFEDRRPASNMDPYVVTGMIAETTILW 354
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLN13_ORYSJ (Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.125e-65 Identity = 116/134 (86.57%), Postives = 127/134 (94.78%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITEIAGVV+SFDPKPI GDWNGAGAH NYSTKSMR++GG +VIKKAI+KLG RH EHIAAYG+GNERRLTGRHETADIN F WGVANRGAS+RVGRDTEK+GKGYFEDRRPASNMDPY+VT+MIAETTILW+P Sbjct: 225 RITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRSNGGYEVIKKAIKKLGMRHREHIAAYGDGNERRLTGRHETADINNFVWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYLVTAMIAETTILWEP 358
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.055e-64 Identity = 117/138 (84.78%), Postives = 126/138 (91.30%), Query Frame = -3 Query: 210 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP*KTN 623 RITEIAGVV+SFDPKPI GDWNGAGAH NYSTKSMR+DGG +VIKKAI KLG RH EHIAAYG+GNER LTGRHETADINTF WGV NRGAS+RVGRDTEKEGKGYFEDRRPASNMDPYVVT +IAETT+LW+P +N Sbjct: 222 RITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRSDGGYEVIKKAIGKLGLRHREHIAAYGDGNERPLTGRHETADINTFVWGVPNRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTCLIAETTMLWEPSHSN 359
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLN12_ORYSJ (Glutamine synthetase cytosolic isozyme 1-2 OS=Oryza sativa subsp. japonica GN=GLN1-2 PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.378e-64 Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = -3 Query: 225 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 623 R+TE+AGVVLS DPKPI GDWNGAGAH N+STKSMR GG +VIKKAI+KL RH EHIAAYGEGNERRLTGRHETADINTF WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVT MIAETT+LWK Sbjct: 223 RVTEVAGVVLSLDPKPIPGDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLWK 355
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLN13_ARATH (Glutamine synthetase cytosolic isozyme 1-3 OS=Arabidopsis thaliana GN=GLN1-3 PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.350e-64 Identity = 115/131 (87.79%), Postives = 125/131 (95.42%), Query Frame = -3 Query: 231 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 623 RITEI+GV++SFDPKP+ GDWNGAGAH NYSTK+MRNDGG++VIKKAI KL +H EHIAAYGEGNERRLTG+HETADINTFSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL Sbjct: 223 RITEISGVIVSFDPKPVPGDWNGAGAHCNYSTKTMRNDGGLEVIKKAIGKLQLKHKEHIAAYGEGNERRLTGKHETADINTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 353
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA3_MAIZE (Glutamine synthetase root isozyme 3 OS=Zea mays GN=GLN4 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.523e-63 Identity = 114/134 (85.07%), Postives = 124/134 (92.54%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITEIAGVV++FDPKPI GDWNGAGAH NYST+SMR +GG +VIK AIEKL RH EHIAAYGEGN+ RLTGRHETADINTFSWGVANRGAS+RVGR+TE+ GKGYFEDRRPASNMDPYVVTSMIAETTI+WKP Sbjct: 223 RITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHREHIAAYGEGNDGRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETTIIWKP 356
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA3_HORVU (Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 5.788e-63 Identity = 113/134 (84.33%), Postives = 123/134 (91.79%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITEIAGVV++FDPKPI GDWNGAGAH NYST+SMRNDGG VI A+EKL +H EHIAAYGEGNERRLTG+HETADINT SWGVANRGAS+RVGR+TE+ GKGYFEDRRPASNMDPYVVTSMIA+TTILWKP Sbjct: 223 RITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRNDGGFKVIVDAVEKLKLKHKEHIAAYGEGNERRLTGKHETADINTSSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAQTTILWKP 356 The following BLAST results are available for this feature:
BLAST of CN189212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189212 ID=CN189212; Name=CN189212; organism=Citrus sinensis; type=EST; length=625bpback to top |