CN189211

Overview
NameCN189211
Unique NameCN189211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.703e-42
Identity = 84/111 (75.68%), Postives = 94/111 (84.68%), Query Frame = -2
Query:  321 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 653
            IPDGWMGLD+G D++K F EAL  TKT+IWNG MGVFE+ KFAAG+EAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK L G+ A D+A
Sbjct:  290 IPDGWMGLDIGPDSVKVFQEALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.837e-42
Identity = 86/113 (76.11%), Postives = 93/113 (82.30%), Query Frame = -2
Query:  321 TAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 659
            TAIPDGWMGLD+G DAIK F  AL   KT+IWNG MGVFE+ KFAAG+ AIA  LAE+ GKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK L GV A D+A
Sbjct:  289 TAIPDGWMGLDIGPDAIKVFQAALADCKTVIWNGPMGVFEFDKFAAGTNAIATTLAEIGGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDNA 401          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.838e-41
Identity = 83/111 (74.77%), Postives = 93/111 (83.78%), Query Frame = -2
Query:  321 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 653
            IPDGWMGLD+G D++K F  AL  TKT+IWNG MGVFE+ KFAAG+EAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK L G+ A D+A
Sbjct:  290 IPDGWMGLDIGPDSVKVFQAALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.400e-41
Identity = 84/112 (75.00%), Postives = 93/112 (83.04%), Query Frame = -2
Query:  321 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 656
            AIPDGWMGLD+G D+I  F +AL   +T+IWNG MGVFE+ KFAAG+ AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK L GV A DDA
Sbjct:  290 AIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.400e-41
Identity = 84/112 (75.00%), Postives = 93/112 (83.04%), Query Frame = -2
Query:  321 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 656
            AIPDGWMGLD+G D+I  F +AL   +T+IWNG MGVFE+ KFAAG+ AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK L GV A DDA
Sbjct:  290 AIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SYNPW (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH7803) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.094e-41
Identity = 84/113 (74.34%), Postives = 92/113 (81.42%), Query Frame = -2
Query:  321 TAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 659
            TAIPDGWMGLD+G DA+K F  AL   +T+IWNG MGVFE+ KFA G+ AIA  LAELS KG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK L GV A +DA
Sbjct:  289 TAIPDGWMGLDIGPDAVKVFQAALADCQTVIWNGPMGVFEFEKFATGTNAIATTLAELSAKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALNDA 401          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.984e-41
Identity = 83/112 (74.11%), Postives = 92/112 (82.14%), Query Frame = -2
Query:  321 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 656
            AIPDGWMGLD+G D++K F EALD   T IWNG MGVFE+ KFA G+EAIAK LA  +  G  TIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK L G++A DDA
Sbjct:  287 AIPDGWMGLDIGADSVKVFQEALDGCGTAIWNGPMGVFEFDKFAVGTEAIAKTLAGATETGTVTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKELPGIVALDDA 398          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.121e-41
Identity = 81/111 (72.97%), Postives = 93/111 (83.78%), Query Frame = -2
Query:  321 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 653
            IPDGWMGLD+G D++K F +AL   K++IWNG MGVFE+ KFA G+EAIA  L  L+GKG TTIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK L G+ A D+A
Sbjct:  291 IPDGWMGLDIGPDSVKLFQDALADCKSVIWNGPMGVFEFDKFAKGTEAIAYTLETLTGKGATTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDEA 401          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.556e-40
Identity = 83/112 (74.11%), Postives = 92/112 (82.14%), Query Frame = -2
Query:  321 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 656
            AIPDGWMGLD+G D+IK F EAL   +T+IWNG MGVFE+ KFA G+ +IA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK L GV A D A
Sbjct:  290 AIPDGWMGLDIGPDSIKVFQEALADCQTVIWNGPMGVFEFDKFATGTNSIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDAA 401          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.032e-40
Identity = 81/112 (72.32%), Postives = 94/112 (83.93%), Query Frame = -2
Query:  321 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 656
            AIPD WMGLD+G  ++K F EAL   KT+IWNG MGVFE+ +FA G+EAIA+ LAEL+ +GV TIIGGGDSVAAVEKVG+AD+MSHISTGGGASLELLEGK L G+ A DDA
Sbjct:  289 AIPDDWMGLDIGPASVKRFQEALQDCKTVIWNGPMGVFEFDQFAKGTEAIARYLAELTSQGVCTIIGGGDSVAAVEKVGVADRMSHISTGGGASLELLEGKQLPGIAALDDA 400          
The following BLAST results are available for this feature:
BLAST of CN189211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ANAVT3.703e-4275.68Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_SYNS94.837e-4276.11Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_ANASP1.838e-4174.77Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_PROMM2.400e-4175.00Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM32.400e-4175.00Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNPW4.094e-4174.34Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNP26.984e-4174.11Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_CYAP79.121e-4172.97Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNSC1.556e-4074.11Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_THEEB2.032e-4072.32Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189211 ID=CN189211; Name=CN189211; organism=Citrus sinensis; type=EST; length=663bp
GCGGATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTCCCAATCAT
CAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCTTGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAAAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTCATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCTCACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAAGAACTGGGTTTAAGCATCATCAAAAGCAAGCACACCATGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCTACTGAATCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCACTGCCAGCAGCAAATTTATGATATTCAAACACAC
CCATACGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCACGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCT
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