CN189211

Overview
NameCN189211
Unique NameCN189211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_BACSK (Phosphoglycerate kinase OS=Bacillus clausii (strain KSM-K16) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.511e-27
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = -2 
Query:  324 TAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 659
            + IP  W  LD+G    K++   L  +K +IWNG MGVFE   FA G++A+A  LAE S     ++IGGGDS AAVE+ GLADKMSHISTGGGASLE +EGK L GV+A  +
Sbjct:  284 SGIPADWEALDIGPKTRKTYEAVLKASKLVIWNGPMGVFELESFAGGTKAVANALAEASD--TYSVIGGGDSAAAVEQFGLADKMSHISTGGGASLEFMEGKELPGVVALSE 393
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_LACPL (Phosphoglycerate kinase OS=Lactobacillus plantarum GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27
Identity = 60/111 (54.05%), Postives = 79/111 (71.17%), Query Frame = -2 
Query:  324 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 656
            +IPDG+M LD+G  +I+ F + L   KT++WNG MGVFE   +A G+  I K L  LS    TTI+GGGDS AAV+++G+ DK++HISTGGGASLE LEGK L G+ A  +
Sbjct:  291 SIPDGYMALDIGPKSIEEFEDVLRDAKTVVWNGPMGVFEMSNYAKGTLEIGKFLGTLSD--ATTIVGGGDSTAAVKQLGVGDKLTHISTGGGASLEYLEGKELPGIAAISE 399
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CLOD6 (Phosphoglycerate kinase OS=Clostridium difficile (strain 630) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27
Identity = 57/110 (51.82%), Postives = 81/110 (73.64%), Query Frame = -2 
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            + + +MGLD+G   I +F + +  +KT++WNG MGVFE+  FA G+ ++A+ +AEL+    TT+IGGGDS AAV ++G  DKM+H+STGGGASLE LEGK L G+ A D+
Sbjct:  292 VKEDYMGLDMGPKTIANFVKTIKESKTVVWNGPMGVFEFENFANGTLSVARAMAELTD--ATTVIGGGDSAAAVNQLGFGDKMTHVSTGGGASLEFLEGKELPGIAALDN 399
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CLOBM (Phosphoglycerate kinase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27
Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = -2 
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            + +G+MGLD+G    K +++A+ + KT+IWNG MGVFE+  FA G+  +AK +A+       TIIGGGDS AAV   G  DKMSHISTGGGASLE LEGK L G+ A +D
Sbjct:  291 VKEGYMGLDIGSKTAKIYADAIKSAKTVIWNGPMGVFEFKNFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNIFGFGDKMSHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CLOBL (Phosphoglycerate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27
Identity = 60/110 (54.55%), Postives = 78/110 (70.91%), Query Frame = -2 
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            I +G+MGLD+G    K +S+A+ + KT++WNG MGVFE+  FA G+  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK L G+ A +D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CLOBK (Phosphoglycerate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27
Identity = 60/110 (54.55%), Postives = 78/110 (70.91%), Query Frame = -2 
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            I +G+MGLD+G    K +S+A+ + KT++WNG MGVFE+  FA G+  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK L G+ A +D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CLOBJ (Phosphoglycerate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27
Identity = 60/110 (54.55%), Postives = 78/110 (70.91%), Query Frame = -2 
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            I +G+MGLD+G    K +S+A+ + KT++WNG MGVFE+  FA G+  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK L G+ A +D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CLOBH (Phosphoglycerate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27
Identity = 60/110 (54.55%), Postives = 78/110 (70.91%), Query Frame = -2 
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            I +G+MGLD+G    K +S+A+ + KT++WNG MGVFE+  FA G+  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK L G+ A +D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CLOB1 (Phosphoglycerate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.973e-27
Identity = 60/110 (54.55%), Postives = 78/110 (70.91%), Query Frame = -2 
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            I +G+MGLD+G    K +S+A+ + KT++WNG MGVFE+  FA G+  +AK +A+       TIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK L G+ A +D
Sbjct:  291 IGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVAKAMAD---SDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_MYCVP (Phosphoglycerate kinase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27
Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = -2 
Query:  339 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLHGV 662
            A  IPD  MGLD+G +++K F+  L   KTI WNG MGVFE+  FAAG++ +A+ +   +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK L G+
Sbjct:  295 ADRIPDDKMGLDIGPESVKRFTALLSNAKTIFWNGPMGVFEFPAFAAGTKGVAEAIIGATGKGAFSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGI 403
The following BLAST results are available for this feature:
BLAST of CN189211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACSK1.511e-2755.36Phosphoglycerate kinase OS=Bacillus clausii (strai... [more]
PGK_LACPL1.973e-2754.05Phosphoglycerate kinase OS=Lactobacillus plantarum... [more]
PGK_CLOD61.973e-2751.82Phosphoglycerate kinase OS=Clostridium difficile (... [more]
PGK_CLOBM1.973e-2754.55Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBL1.973e-2754.55Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBK1.973e-2754.55Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBJ1.973e-2754.55Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBH1.973e-2754.55Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB11.973e-2754.55Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_MYCVP2.577e-2755.05Phosphoglycerate kinase OS=Mycobacterium vanbaalen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189211 ID=CN189211; Name=CN189211; organism=Citrus sinensis; type=EST; length=663bp
GCGGATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTCCCAATCAT
CAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCTTGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAAAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTCATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCTCACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAAGAACTGGGTTTAAGCATCATCAAAAGCAAGCACACCATGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCTACTGAATCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCACTGCCAGCAGCAAATTTATGATATTCAAACACAC
CCATACGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCACGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCT
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