CN189211

Overview
NameCN189211
Unique NameCN189211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_XYLFT (Phosphoglycerate kinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 47/100 (47.00%), Postives = 71/100 (71.00%), Query Frame = -2 
Query:  333 LDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLA 632
            LD+G    + ++  ++T  T++WNG +GVFE+  F+ G+E +A+ +A  S     +I GGGD++AA++K G+AD++S+ISTGGGA LE LEGKTL  V A
Sbjct:  289 LDIGPQTARHYAALIETAATVVWNGPVGVFEFDAFSKGTEVLARAVAASSA---FSIAGGGDTLAAIDKYGVADQISYISTGGGAFLEFLEGKTLPAVAA 385
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_XYLFA (Phosphoglycerate kinase OS=Xylella fastidiosa GN=pgk PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 47/100 (47.00%), Postives = 71/100 (71.00%), Query Frame = -2 
Query:  333 LDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLA 632
            LD+G    + ++  ++T  T++WNG +GVFE+  F+ G+E +A+ +A  S     +I GGGD++AA++K G+AD++S+ISTGGGA LE LEGKTL  V A
Sbjct:  289 LDIGPQTARHYAALIETAATVVWNGPVGVFEFDAFSKGTEVLARAVAASSA---FSIAGGGDTLAAIDKYGVADQISYISTGGGAFLEFLEGKTLPAVAA 385
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SHEPA (Phosphoglycerate kinase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 49/105 (46.67%), Postives = 72/105 (68.57%), Query Frame = -2 
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M  D+G D+ ++ +E +    T++WNG +GVFE+ +F  G++ IA+ +AE       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK L  V
Sbjct:  282 VSDTDMIFDIGPDSAEALAEIIKNAGTVVWNGPVGVFEFDQFGEGTKRIAQAIAE---SNAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAV 383
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEPF (Phosphoglycerate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 48/100 (48.00%), Postives = 72/100 (72.00%), Query Frame = -2 
Query:  339 MGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 638
            M LD+G     +F+E L ++KTI+WNG +GVFE+ +F  G++ +A+ +AE       +I GGGD++AA++K G+A+K+S+ISTGGGA LE +EGK L  V
Sbjct:  282 MILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGNGTKVLAEAIAE---SAAFSIAGGGDTLAAIDKYGVAEKISYISTGGGAFLEFVEGKVLPAV 378
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEAE (Phosphoglycerate kinase OS=Pseudomonas aeruginosa GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = -2 
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M LD+G      F+E L T+KTI+WNG +GVFE+ +F  G+  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK L  V
Sbjct:  277 VADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAV 378
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEAB (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = -2 
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M LD+G      F+E L T+KTI+WNG +GVFE+ +F  G+  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK L  V
Sbjct:  277 VADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAV 378
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEA8 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = -2 
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M LD+G      F+E L T+KTI+WNG +GVFE+ +F  G+  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK L  V
Sbjct:  277 VADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAV 378
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_HALHL (Phosphoglycerate kinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = -2 
Query:  327 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFD 656
            A+PD  M LDVG      +   L    T++WNG +GVFE   FA G+ A+A+ +A   G    +I GGGD++AAVE+ G+ D++S+ISTGGGA LE LEG+ L GV A +
Sbjct:  281 AVPDDEMILDVGPQTRARYDGMLRNAGTVVWNGPVGVFEMAPFAGGTRALAEAIAASDG---FSIAGGGDTLAAVEQFGITDQVSYISTGGGAFLEFLEGRVLPGVAALE 387
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_ACTPJ (Phosphoglycerate kinase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 45/97 (46.39%), Postives = 67/97 (69.07%), Query Frame = -2 
Query:  339 DVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 629
            D+G  + +  +  + + KTI+WNG +GVFE+  F  G+E I+  +AE +  G  +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK L  V
Sbjct:  286 DIGDKSAEELANIIKSAKTILWNGPVGVFEFPNFRKGTEVISNAIAEATANGAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAV 382
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_ACTP7 (Phosphoglycerate kinase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20
Identity = 45/97 (46.39%), Postives = 67/97 (69.07%), Query Frame = -2 
Query:  339 DVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 629
            D+G  + +  +  + + KTI+WNG +GVFE+  F  G+E I+  +AE +  G  +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK L  V
Sbjct:  286 DIGDKSAEELANIIKSAKTILWNGPVGVFEFPNFRKGTEVISNAIAEATANGAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAV 382
The following BLAST results are available for this feature:
BLAST of CN189211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_XYLFT2.336e-2047.00Phosphoglycerate kinase OS=Xylella fastidiosa (str... [more]
PGK_XYLFA2.336e-2047.00Phosphoglycerate kinase OS=Xylella fastidiosa GN=p... [more]
PGK_SHEPA2.336e-2046.67Phosphoglycerate kinase OS=Shewanella pealeana (st... [more]
PGK_PSEPF2.336e-2048.00Phosphoglycerate kinase OS=Pseudomonas fluorescens... [more]
PGK_PSEAE2.336e-2045.71Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEAB2.336e-2045.71Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEA82.336e-2045.71Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_HALHL2.336e-2047.27Phosphoglycerate kinase OS=Halorhodospira halophil... [more]
PGK_ACTPJ2.336e-2046.39Phosphoglycerate kinase OS=Actinobacillus pleuropn... [more]
PGK_ACTP72.336e-2046.39Phosphoglycerate kinase OS=Actinobacillus pleuropn... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189211 ID=CN189211; Name=CN189211; organism=Citrus sinensis; type=EST; length=663bp
GCGGATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTCCCAATCAT
CAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCTTGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAAAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTCATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCTCACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAAGAACTGGGTTTAAGCATCATCAAAAGCAAGCACACCATGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCTACTGAATCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCACTGCCAGCAGCAAATTTATGATATTCAAACACAC
CCATACGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCACGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCT
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