CN189211

Overview
NameCN189211
Unique NameCN189211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_YERPN (Phosphoglycerate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = -2 
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 662
            A  I D    LD+G ++ +  +E L   KTI+WNG +GVFE+  F  G+E +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  274 ANEIKDDEQILDLGDESAERLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_YERPG (Phosphoglycerate kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = -2 
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 662
            A  I D    LD+G ++ +  +E L   KTI+WNG +GVFE+  F  G+E +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  274 ANEIKDDEQILDLGDESAERLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_YERPE (Phosphoglycerate kinase OS=Yersinia pestis GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = -2 
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 662
            A  I D    LD+G ++ +  +E L   KTI+WNG +GVFE+  F  G+E +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  274 ANEIKDDEQILDLGDESAERLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_YERPB (Phosphoglycerate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = -2 
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 662
            A  I D    LD+G ++ +  +E L   KTI+WNG +GVFE+  F  G+E +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  274 ANEIKDDEQILDLGDESAERLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_YERPA (Phosphoglycerate kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = -2 
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 662
            A  I D    LD+G ++ +  +E L   KTI+WNG +GVFE+  F  G+E +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  274 ANEIKDDEQILDLGDESAERLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_YERP3 (Phosphoglycerate kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = -2 
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 662
            A  I D    LD+G ++ +  +E L   KTI+WNG +GVFE+  F  G+E +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  274 ANEIKDDEQILDLGDESAERLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_YERE8 (Phosphoglycerate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = -2 
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 662
            A  I D    LD+G ++ +  +E L   KTI+WNG +GVFE+  F  G+E +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  274 ANQIKDDEQILDLGDESAERLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_STRM5 (Phosphoglycerate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = -2 
Query:  327 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFD 656
            A+ +  + LD+G      +++ ++   T++WNG +GVFE+  F+ G+EA+A+ +A        +I GGGD++AAV+K  +A ++S+ISTGGGA LE LEGKTL  V A D
Sbjct:  281 AVAEDDLILDIGPQTAAQYAQLIENAGTVVWNGPVGVFEFEAFSKGTEALARAIAS---SNAFSIAGGGDTLAAVDKFDIAAQVSYISTGGGAFLEFLEGKTLPAVAALD 387
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_MYCPN (Phosphoglycerate kinase OS=Mycoplasma pneumoniae GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = -2 
Query:  339 GWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 644
            G+M LDVG   +  FS  L   KTI WNG MGVFE+  +A G+ AI K +A+   +   ++IGGGDS AA +++ +AD+ S ISTGGGASL L+ G+ L G+
Sbjct:  304 GFMSLDVGSKTVALFSSYLAKAKTIFWNGPMGVFEFSNYAQGTLAIGKAIAQ--NQQAFSVIGGGDSAAAAKQLQIADQFSFISTGGGASLALIGGEELVGI 403
[Close]
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_MARMS (Phosphoglycerate kinase OS=Marinomonas sp. (strain MWYL1) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.159e-19
Identity = 49/100 (49.00%), Postives = 71/100 (71.00%), Query Frame = -2 
Query:  339 MGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 638
            M LD+G  A  +F+  L+ ++TIIWNG +GVFE+ +F  G++A+A  +A   G    +I GGGD++AAV+K  +AD++S+ISTGGGA LE +EGK L  V
Sbjct:  282 MILDIGPKAAAAFAALLEESQTIIWNGPVGVFEFDQFGGGTKALAMAIANSKG---FSIAGGGDTLAAVDKYDIADQVSYISTGGGAFLEFVEGKVLPAV 378
The following BLAST results are available for this feature:
BLAST of CN189211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_YERPN1.159e-1943.36Phosphoglycerate kinase OS=Yersinia pestis bv. Ant... [more]
PGK_YERPG1.159e-1943.36Phosphoglycerate kinase OS=Yersinia pestis bv. Ant... [more]
PGK_YERPE1.159e-1943.36Phosphoglycerate kinase OS=Yersinia pestis GN=pgk ... [more]
PGK_YERPB1.159e-1943.36Phosphoglycerate kinase OS=Yersinia pseudotubercul... [more]
PGK_YERPA1.159e-1943.36Phosphoglycerate kinase OS=Yersinia pestis bv. Ant... [more]
PGK_YERP31.159e-1943.36Phosphoglycerate kinase OS=Yersinia pseudotubercul... [more]
PGK_YERE81.159e-1943.36Phosphoglycerate kinase OS=Yersinia enterocolitica... [more]
PGK_STRM51.159e-1942.73Phosphoglycerate kinase OS=Stenotrophomonas maltop... [more]
PGK_MYCPN1.159e-1949.02Phosphoglycerate kinase OS=Mycoplasma pneumoniae G... [more]
PGK_MARMS1.159e-1949.00Phosphoglycerate kinase OS=Marinomonas sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189211 ID=CN189211; Name=CN189211; organism=Citrus sinensis; type=EST; length=663bp
GCGGATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTCCCAATCAT
CAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCTTGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAAAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTCATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCTCACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAAGAACTGGGTTTAAGCATCATCAAAAGCAAGCACACCATGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCTACTGAATCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCACTGCCAGCAGCAAATTTATGATATTCAAACACAC
CCATACGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCACGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCT
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