CN189211

Overview
NameCN189211
Unique NameCN189211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_AZOVD (Phosphoglycerate kinase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=pgk PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.583e-19
Identity = 46/110 (41.82%), Postives = 73/110 (66.36%), Query Frame = -2
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            + D  M LD+G      F+E L +++TI+WNG +GVFE+ +F  G++ +A+ +A        +I GGGD++AA++K G+ +K+S+ISTGGGA LE +EGK L  V   ++
Sbjct:  277 VADDDMILDIGPQTAAQFAELLKSSRTILWNGPVGVFEFDQFGNGTKVLAEAIA---ASPAFSIAGGGDTLAAIDKYGVGEKISYISTGGGAFLEFVEGKVLPAVAVLEE 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_WOLWR (Phosphoglycerate kinase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=pgk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 48/110 (43.64%), Postives = 77/110 (70.00%), Query Frame = -2
Query:  333 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLHGVLA 656
            +I DG + LD+G   + + S  + ++KT++WNG +GVFE+  FA+G+  + K +++L+ KG +T+IIGGGDS++A+   GL DK  +++STGGGA L+ L G  + GV A
Sbjct:  283 SILDGDIILDIGSQTLSTISSIIASSKTLLWNGPIGVFEHSAFASGTIGVMKIVSDLTHKGKLTSIIGGGDSLSAISAAGLTDKDFTYVSTGGGAFLDWLSGDEMPGVAA 392          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SHESR (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-7) GN=pgk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 47/105 (44.76%), Postives = 73/105 (69.52%), Query Frame = -2
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M  D+G D+ ++ ++ +++  TI+WNG +GVFE+ +F  G++ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK L  V
Sbjct:  282 VGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIADSKA---FSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAV 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SHESA (Phosphoglycerate kinase OS=Shewanella sp. (strain ANA-3) GN=pgk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 47/105 (44.76%), Postives = 73/105 (69.52%), Query Frame = -2
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M  D+G D+ ++ ++ +++  TI+WNG +GVFE+ +F  G++ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK L  V
Sbjct:  282 VGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIADSKA---FSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAV 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_RALSO (Phosphoglycerate kinase OS=Ralstonia solanacearum GN=pgk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = -2
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M LD+G       ++ L  + TI+WNG +GVFE+ +F  G++ +A+ +A  SG    +I GGGD++AA+ K G+AD++ +ISTGGGA LE LEGKTL  V
Sbjct:  304 VADDDMILDIGPKTAAQLADQLKASGTIVWNGPVGVFEFDQFGNGTKVLAEAIAASSG---FSIAGGGDTLAAIAKYGIADRVGYISTGGGAFLEFLEGKTLPAV 405          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEF5 (Phosphoglycerate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pgk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 46/105 (43.81%), Postives = 72/105 (68.57%), Query Frame = -2
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M LD+G      F+E L +++TI+WNG +GVFE+ +F  G++ +A+ +A+       +I GGGD++AA++K G+A ++S+ISTGGGA LE +EGK L  V
Sbjct:  277 VADDDMILDIGPQTAAQFAELLKSSRTILWNGPVGVFEFDQFGNGTKVLAQAIAD---SAAFSIAGGGDTLAAIDKYGVAQQISYISTGGGAFLEFVEGKVLPAV 378          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PHOLU (Phosphoglycerate kinase OS=Photorhabdus luminescens GN=pgk PE=3 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = -2
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            I D    LD+G ++ +  ++ L   KTI+WNG +GVFE+  F  G+E +A+ +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  277 IKDDEQILDLGDESAQRLADILKNAKTILWNGPVGVFEFPNFRQGTEIVARAIAD---SDAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKKLPAVVMLEE 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PHOLL (Phosphoglycerate kinase OS=Photorhabdus luminescens subsp. laumondii GN=pgk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = -2
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            I D    LD+G ++ +  ++ L   KTI+WNG +GVFE+  F  G+E +A+ +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK L  V+  ++
Sbjct:  277 IKDDEQILDLGDESAQRLADILKNAKTILWNGPVGVFEFPNFRQGTEIVARAIAD---SDAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKKLPAVVMLEE 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_MYCGE (Phosphoglycerate kinase OS=Mycoplasma genitalium GN=pgk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = -2
Query:  339 WMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 641
            +M LDVG   I  F   L T KTI WNG +GVFE+  FA G+  I + +A+   K   ++IGGGDS AAV+++ L+D+ S ISTGGGASL L+ G+ L G+
Sbjct:  311 YMSLDVGSKTIALFESYLKTAKTIFWNGPLGVFEFTNFAKGTSKIGEIIAK--NKTAFSVIGGGDSAAAVKQMQLSDQFSFISTGGGASLALIGGEELVGI 409          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_HELHP (Phosphoglycerate kinase OS=Helicobacter hepaticus GN=pgk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.373e-19
Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = -2
Query:  348 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTL 662
            A  IP+G+M +D+G    K FSE +  ++TIIWNG +G++E   F+ G+  +A  +++       ++IGGGD+  A++K G  D MS ISTGGGASLELLEGK L
Sbjct:  292 AQDIPEGFMAVDMGPATSKLFSEVVRDSQTIIWNGPLGIYEIQAFSRGTFNLAHAVSDTYA---FSLIGGGDTADAIDKAGERDNMSFISTGGGASLELLEGKIL 393          
The following BLAST results are available for this feature:
BLAST of CN189211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_AZOVD2.583e-1941.82Phosphoglycerate kinase OS=Azotobacter vinelandii ... [more]
PGK_WOLWR3.373e-1943.64Phosphoglycerate kinase OS=Wolbachia sp. subsp. Dr... [more]
PGK_SHESR3.373e-1944.76Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SHESA3.373e-1944.76Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_RALSO3.373e-1945.71Phosphoglycerate kinase OS=Ralstonia solanacearum ... [more]
PGK_PSEF53.373e-1943.81Phosphoglycerate kinase OS=Pseudomonas fluorescens... [more]
PGK_PHOLU3.373e-1942.73Phosphoglycerate kinase OS=Photorhabdus luminescen... [more]
PGK_PHOLL3.373e-1942.73Phosphoglycerate kinase OS=Photorhabdus luminescen... [more]
PGK_MYCGE3.373e-1949.50Phosphoglycerate kinase OS=Mycoplasma genitalium G... [more]
PGK_HELHP3.373e-1946.67Phosphoglycerate kinase OS=Helicobacter hepaticus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189211 ID=CN189211; Name=CN189211; organism=Citrus sinensis; type=EST; length=663bp
GCGGATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTCCCAATCAT
CAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCTTGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAAAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTCATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCTCACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAAGAACTGGGTTTAAGCATCATCAAAAGCAAGCACACCATGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCTACTGAATCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCACTGCCAGCAGCAAATTTATGATATTCAAACACAC
CCATACGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCACGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCT
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