CN189205

Overview
NameCN189205
Unique NameCN189205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.764e-26
Identity = 62/110 (56.36%), Postives = 79/110 (71.82%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 678
            +T L+R VP AVPGI FLSGGQSE++AT NLNA+N  Q   PW ++FSY RALQ +VLK W G+ EN  AAQK+LL R+KAN  A LGKY+ E  +  A + +FV  ++Y
Sbjct:  257 VTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 6.702e-26
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 678
            +T L+R VPPAVPG+ FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G+S   A + +F+  + Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26
Identity = 57/106 (53.77%), Postives = 76/106 (71.70%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 669
            L+R VPPA+PG++FLSGGQSE EA++NLN++N   P+PW ++FSY RALQ +VL TWQG+ EN   A++ LL RA+ANSLA  GKY      E A   ++ + Y Y
Sbjct:  264 LRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26
Identity = 57/106 (53.77%), Postives = 76/106 (71.70%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 669
            L+R VPPA+PG++FLSGGQSE EA++NLN++N   P+PW ++FSY RALQ +VL TWQG+ EN   A++ LL RA+ANSLA  GKY      E A   ++ + Y Y
Sbjct:  264 LRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25
Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 678
            +T L+R VP AVPGI FLSGGQSE EA+LNLNAMNQ     PW +SFSY RALQ + L  W+G+  N +A+Q + + RAK NSLA  G+Y   G++ +A  + +F   YTY
Sbjct:  254 VTALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.674e-25
Identity = 58/111 (52.25%), Postives = 78/111 (70.27%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 678
            +T L+R VPPAV G+ FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G+S   A + +F+  + Y
Sbjct:  254 VTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 7.410e-25
Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESE-EAKKGMFVRGYTY 678
            +T L R VP AVPGI FLSGGQSE EA+LNLNAMNQ+P   PW ++FSY RALQ + L  W G+ EN +AAQ++   RA+ NSLA  G+Y   G+++  A + +F   YTY
Sbjct:  254 VTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25
Identity = 55/107 (51.40%), Postives = 74/107 (69.16%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 669
            L+R VP AVPG++FLSGGQSE++AT NLNA+N+ P   PW +SFS+ RALQ + +  WQG+PEN +A Q   L  AKAN  A LGK+  E ++   +K +FV  + Y
Sbjct:  257 LQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25
Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 678
            +T L+R VPPAV GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +FV  + Y
Sbjct:  254 VTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25
Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 678
            +T L+R VPPAV GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +FV  + Y
Sbjct:  254 VTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
The following BLAST results are available for this feature:
BLAST of CN189205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALF2_CAEEL1.764e-2656.36Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALDOA_RAT6.702e-2653.15Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALF_PLAFA8.753e-2653.77Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF78.753e-2653.77Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALDOB_DANRE4.344e-2553.15Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALDOA_MOUSE5.674e-2552.25Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOB_CHICK7.410e-2554.05Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALF_ECHMU9.678e-2551.40Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALDOA_PONAB9.678e-2553.15Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_PANTR9.678e-2553.15Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0001H19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189205 ID=CN189205; Name=CN189205; organism=Citrus sinensis; type=EST; length=678bp
AGGATTTAAATATCAACTGGAGACATGAAAAAAGAAAAAAAAAAAAAAGT
AGAACTCATAATTTAGAGTACAGTAGCATAAAAACATAGAAATACAATGA
TTCTTGTTTAACTAGTACCCCTTTCGCTGGGCTACAGTTTGTAAAATCTT
TTCTTATCTCACAGGTTTTATTCAAGCTCTCTATTTATTAGGTGGATAAA
AGAAAATGAAAAAACTTCTAATAGAAATCTTGTCCGTATCCCAAAAAAAT
TTTAAAAAAAAGGGAAGGAACCAAAACAAAAGCAAGTGCACAATGACACA
AGTGTCATGAGTTGCCTCAGGCAAGCTCAAACTGCATAGTATATTATTGG
CTTAGTAAGTGTAGCCCCTGACAAACATTCCTTTCTTGGCTTCCTCGCTT
TCACCTTCTGCGGAATACTTCCCAAGCTGCGCCAAGGAATTTGCCTTTGC
ACGCACCAATAGTGACTTTTGTGCAGCTTCAGTATTCTCAGGACGACCTT
GCCATGTCTTAAGAACAGTGTTCTGAAGCGCCCGGGCATAAGAAAAGGAC
ACGTGCCAGGGGTTGGGGGCTTGGTTCATCGCATTCAAGTTCAATGTTGC
TTCCACTTCTGATTGTCCTCCAGACAAAAACATGATTCCTGGGACTGCAG
GGGGTACTCTCCTCTTGAGCATTGTAAG
back to top