CN189205

Overview
NameCN189205
Unique NameCN189205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25
Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 678
            +T L+R VPPAV GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +FV  + Y
Sbjct:  254 VTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.264e-24
Identity = 55/106 (51.89%), Postives = 74/106 (69.81%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 669
            L+R VPPA+PG+ FLSGGQSE +A++NLN++N   P+PW ++FSY RALQ +VL TWQG+ EN   A++ LL RA+ANSLA  GKY        A   ++ + Y Y
Sbjct:  253 LRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPHPWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAGGSTAGASLYEKKYVY 358          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24
Identity = 59/107 (55.14%), Postives = 71/107 (66.36%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 669
            L+R VP AVPGI+FLSGGQSE +ATLNLNAMN+     PW +SFS+ RALQ + LKTW G+ EN   AQ   L R KANS A LGKY     +  A + + V+ Y Y
Sbjct:  251 LRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGLASESLHVKDYKY 357          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESE-EAKKGMFVRGYTY 678
            +T L+R VP AVPG++FLSGGQSE +ATLNLNA+NQ     PW ++FSY RALQ + L  W G+ EN  AAQ+ LL RA+ NSLA +GKY+ +  ++  A + +FV  ++Y
Sbjct:  256 VTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24
Identity = 54/110 (49.09%), Postives = 74/110 (67.27%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 678
            +T L+R VPPAVPG+ FLSGGQSE EA+LNLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  GKY   G+   A + ++V  + Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24
Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 678
            +T L+R VPPAV G+ FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +F+  + Y
Sbjct:  254 VTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.678e-24
Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 669
            L+R VPPAVPGI FLSGGQSE++AT NLN +N+   P PW ++FS+ RALQ +VL TW+G+ EN  AAQ+ LL  AKAN  A +GK+     +    K +FV  + Y
Sbjct:  257 LQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.678e-24
Identity = 60/111 (54.05%), Postives = 72/111 (64.86%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 678
            +T L+R VP AVPGI FLSGGQSE +A+LNLNA+NQ P   PW +SFSY RALQ +VLK W G P N  AA+K    RA  N LA  GKY   G S   A + +F+  + Y
Sbjct:  254 VTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.678e-24
Identity = 57/110 (51.82%), Postives = 74/110 (67.27%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 678
            LT L+R VPPAVPGI FLSGGQSE +A+++LNA+N+     PW ++FSY RALQ +VLK W G+ EN +AAQ  L+ RAK N  A  G+Y   G    A + +FV  + Y
Sbjct:  254 LTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 669
            L+R VP AVP ++FLSGGQSE EAT+NLNA+NQ     PW +SFS+ RALQ + LK W G+ EN + AQ +LL RAKANS A LG Y    +  E A + + V+ Y Y
Sbjct:  252 LQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
The following BLAST results are available for this feature:
BLAST of CN189205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALDOA_HUMAN9.678e-2553.15Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALF2_PLABA1.264e-2451.89Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALF1_PEA1.651e-2455.14Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_CAEEL1.651e-2452.25Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOC_RAT1.651e-2449.09Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOA_RABIT1.651e-2451.35Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALF_SCHMA3.678e-2452.34Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALF2_LAMJA3.678e-2454.05Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALF1_LAMJA3.678e-2451.82Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALF_CICAR4.803e-2453.70Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189205 ID=CN189205; Name=CN189205; organism=Citrus sinensis; type=EST; length=678bp
AGGATTTAAATATCAACTGGAGACATGAAAAAAGAAAAAAAAAAAAAAGT
AGAACTCATAATTTAGAGTACAGTAGCATAAAAACATAGAAATACAATGA
TTCTTGTTTAACTAGTACCCCTTTCGCTGGGCTACAGTTTGTAAAATCTT
TTCTTATCTCACAGGTTTTATTCAAGCTCTCTATTTATTAGGTGGATAAA
AGAAAATGAAAAAACTTCTAATAGAAATCTTGTCCGTATCCCAAAAAAAT
TTTAAAAAAAAGGGAAGGAACCAAAACAAAAGCAAGTGCACAATGACACA
AGTGTCATGAGTTGCCTCAGGCAAGCTCAAACTGCATAGTATATTATTGG
CTTAGTAAGTGTAGCCCCTGACAAACATTCCTTTCTTGGCTTCCTCGCTT
TCACCTTCTGCGGAATACTTCCCAAGCTGCGCCAAGGAATTTGCCTTTGC
ACGCACCAATAGTGACTTTTGTGCAGCTTCAGTATTCTCAGGACGACCTT
GCCATGTCTTAAGAACAGTGTTCTGAAGCGCCCGGGCATAAGAAAAGGAC
ACGTGCCAGGGGTTGGGGGCTTGGTTCATCGCATTCAAGTTCAATGTTGC
TTCCACTTCTGATTGTCCTCCAGACAAAAACATGATTCCTGGGACTGCAG
GGGGTACTCTCCTCTTGAGCATTGTAAG
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