CN189205

Overview
NameCN189205
Unique NameCN189205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24
Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 678
            +T L+R VPPAVPG+ FLSGGQSE EA+LNLNA+N+ P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  G+Y   G+   A + +++  + Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.273e-24
Identity = 55/111 (49.55%), Postives = 75/111 (67.57%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEG-ESEEAKKGMFVRGYTY 678
            +T L+R VPPAVPG+ FLSGGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA LGKY   G +S  A + ++V  + Y
Sbjct:   27 VTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24
Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 678
            +T L+R VPPAVPG+ FLSGGQSE EA+ NLNA+N+ P   PW ++FSY RALQ + L  W+G+ +N EAA +  + RA+ N LA  GKY   GE    A + +++  + Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.070e-23
Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 678
            +T L+R VPPAV G+ FLSGGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W+G  EN +AA +  L RA+AN LA  GKY + G    A + ++V  + Y
Sbjct:  254 VTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23
Identity = 58/108 (53.70%), Postives = 71/108 (65.74%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 669
            L+R VP AVP I+FLSGGQSE EATLNLNAMN+     PW +SFS+ RALQ + LK W G+ EN E A+ + L R KANS A LG Y  +    E A + + V+ Y Y
Sbjct:  251 LQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23
Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 678
            +T L+R VPPAVPG+ FLSGGQSE EA+LNLNA+N+ P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  GKY   GE    A + +++  + Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = -1
Query:  355 LKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKY-SAEGESEEAKKGMFVRGYTY 669
            L+R VP AVP ++FLSGGQSE EA++NLNA+NQ     PW +SFS+ RALQ + LK W G+ EN +AAQ +LL RAKANS A LG Y  A      A + + V+ Y Y
Sbjct:  252 LQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23
Identity = 53/111 (47.75%), Postives = 74/111 (66.67%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEA-KKGMFVRGYTY 678
            +T L+R VP +VPGI FLSGGQSE EA+++LNA+NQ P   PW ++FSY RALQ + L  WQG+  N  A Q+  + RAK N LA  G+Y   G +++A ++ ++   Y Y
Sbjct:  254 VTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23
Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 678
            +T L R VP AVPGI FLSGG SE +ATLNLNA+N  P   PW +SFSY RALQ + L  W G+ EN +A Q++ + RA ANS A  G+Y   G S+ A  + +F   YTY
Sbjct:  254 VTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CN189205 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23
Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = -1
Query:  355 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 678
            +T L+R VPPAVPG+ FLSGGQSE EA+ NLNA+N+ P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  GKY   GE    A + +++  + Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
The following BLAST results are available for this feature:
BLAST of CN189205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALDOC_MOUSE4.803e-2447.27Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOC_CHICK6.273e-2449.55Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALDOC_PANTR8.193e-2448.65Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOC_CARAU1.070e-2350.00Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALF_ORYSJ1.825e-2353.70Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALDOC_MACFA1.825e-2348.65Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALF2_PEA3.113e-2353.70Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOB_SPAAU4.066e-2347.75Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOB_SHEEP4.066e-2352.25Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOC_HUMAN5.310e-2347.75Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189205 ID=CN189205; Name=CN189205; organism=Citrus sinensis; type=EST; length=678bp
AGGATTTAAATATCAACTGGAGACATGAAAAAAGAAAAAAAAAAAAAAGT
AGAACTCATAATTTAGAGTACAGTAGCATAAAAACATAGAAATACAATGA
TTCTTGTTTAACTAGTACCCCTTTCGCTGGGCTACAGTTTGTAAAATCTT
TTCTTATCTCACAGGTTTTATTCAAGCTCTCTATTTATTAGGTGGATAAA
AGAAAATGAAAAAACTTCTAATAGAAATCTTGTCCGTATCCCAAAAAAAT
TTTAAAAAAAAGGGAAGGAACCAAAACAAAAGCAAGTGCACAATGACACA
AGTGTCATGAGTTGCCTCAGGCAAGCTCAAACTGCATAGTATATTATTGG
CTTAGTAAGTGTAGCCCCTGACAAACATTCCTTTCTTGGCTTCCTCGCTT
TCACCTTCTGCGGAATACTTCCCAAGCTGCGCCAAGGAATTTGCCTTTGC
ACGCACCAATAGTGACTTTTGTGCAGCTTCAGTATTCTCAGGACGACCTT
GCCATGTCTTAAGAACAGTGTTCTGAAGCGCCCGGGCATAAGAAAAGGAC
ACGTGCCAGGGGTTGGGGGCTTGGTTCATCGCATTCAAGTTCAATGTTGC
TTCCACTTCTGATTGTCCTCCAGACAAAAACATGATTCCTGGGACTGCAG
GGGGTACTCTCCTCTTGAGCATTGTAAG
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