CN189202

Overview
NameCN189202
Unique NameCN189202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30
Identity = 66/139 (47.48%), Postives = 96/139 (69.06%), Query Frame = 1
Query:  298 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAF 714
            I   +++LIG TPLV LN+++EG  A +AVK E F P +S+KDR A AM+E AE    I+   T I+E TSGN G+ +A + A +GYK+ +TMP   S ER++ +RAFGA+LILT  A+GM G + KA+ L+++ P+ +
Sbjct:    3 IANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVKDRIAEAMIEGAEKAGKINKN-TVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTY 140          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 65/137 (47.45%), Postives = 92/137 (67.15%), Query Frame = 1
Query:  307 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717
            D SQ IG+TPLV LN++ +G  A +  K E   P  S+K R   AM+ DAE + L+ PGK  +IEPTSGN GI++AF+AA +G  + LTMP   SLERR  + A+GA L+LT+  KGM G V++A+++  S P+ ++
Sbjct:   10 DNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGKE-LIEPTSGNTGIALAFVAAARGIPLTLTMPETMSLERRKLLAAYGAKLVLTEGVKGMTGAVRRAEDIAASDPDRYV 145          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_FLAS3 (Cysteine synthase OS=Flavobacterium sp. (strain K3-15 / DSM ID92-509) GN=cysK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28
Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 1
Query:  316 QLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717
            + IG TP+V +N +       I +K E   P  SIKDR A+AM+EDAE K L++   +TIIEPTSGN GI +A +AA+KGYK++L MP   S+ERR  M A+GA+ +LT   KGM G ++KA EL E TPN+++
Sbjct:    8 ETIGNTPVVKINNLFNS-DHEIWIKLEKSNPGGSIKDRIALAMIEDAEAKGLLNKD-STIIEPTSGNTGIGLALVAAVKGYKLILVMPESMSIERRKIMEAYGAEFVLTPREKGMKGAIEKANELAEETPNSWI 139          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STRP6 (Cysteine synthase OS=Streptococcus pyogenes serotype M6 GN=cysK PE=1 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28
Identity = 62/133 (46.62%), Postives = 94/133 (70.68%), Query Frame = 1
Query:  292 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQEL 690
            T I + +++L+G+TP++ LN++     A + VK E F P +S+KDR A++M+E AE + LISPG   IIEPTSGN GI +A++ A KGY++++ MP   SLERR  ++A+GA+L+LT  A+GM G + K + L
Sbjct:    2 TKIYKTITELVGQTPIIKLNRLIPNEAADVYVKLEAFNPGSSVKDRIALSMIEAAEAEGLISPGDV-IIEPTSGNTGIGLAWVGAAKGYRVIIVMPETMSLERRQIIQAYGAELVLTPGAEGMKGAIAKTETL 133          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_BACSU (Cysteine synthase OS=Bacillus subtilis GN=cysK PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 63/133 (47.37%), Postives = 91/133 (68.42%), Query Frame = 1
Query:  298 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            +   +++LIG TP+V LN++++   A + +K E   P +S+KDR  +AM+E AE +  +  G T IIEPTSGN GI +A +AA KG K +L MP   S+ERR  +RA+GA+L+LT  A+GM G +KKA+EL E
Sbjct:    4 VANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAGNT-IIEPTSGNTGIGLAMVAAAKGLKAILVMPDTMSMERRNLLRAYGAELVLTPGAEGMKGAIKKAEELAE 135          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STAES (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.345e-27
Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 1
Query:  310 VSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            V+Q+IG TP+V L  V +   A I VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKE 136          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STAEQ (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.345e-27
Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 1
Query:  310 VSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            V+Q+IG TP+V L  V +   A I VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKE 136          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STAAW (Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  307 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKE 136          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STAAS (Cysteine synthase OS=Staphylococcus aureus (strain MSSA476) GN=cysK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  307 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKE 136          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STAAR (Cysteine synthase OS=Staphylococcus aureus (strain MRSA252) GN=cysK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  307 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKE 136          
The following BLAST results are available for this feature:
BLAST of CN189202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CYSK_NEIMB2.218e-3047.48Cysteine synthase OS=Neisseria meningitidis serogr... [more]
SRPG_SYNE73.541e-2847.45Cysteine synthase, plasmid OS=Synechococcus elonga... [more]
CYSK_FLAS34.624e-2850.00Cysteine synthase OS=Flavobacterium sp. (strain K3... [more]
CYSK_STRP66.039e-2846.62Cysteine synthase OS=Streptococcus pyogenes seroty... [more]
CYSK_BACSU1.030e-2747.37Cysteine synthase OS=Bacillus subtilis GN=cysK PE=... [more]
CYSK_STAES1.345e-2751.94Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAEQ1.345e-2751.94Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAAW2.997e-2750.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAS2.997e-2750.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAR2.997e-2750.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H17_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189202 ID=CN189202; Name=CN189202; organism=Citrus sinensis; type=EST; length=718bp
GAGGCATCACCACACTCAGAGCCTTAATTTGTTATCCGCTGCAAGTGCTG
GTGGAAGTGGGAGTGGTTCTTGTAAAGAGTGAATTATTATTTTTGCTCAA
ATTTAAAGTTCCTCCTCCAACCTCCATTATTATTAAAAATGGCTGCTGCT
TTGAGGAGTTTCTTGAAGAAAAGAGCCTTAACATGCAGCGAACCCATGTT
GATGAGAAGACTGGTCTCCTCACAGCCGGCGCCGGTTGATTCTTCATCTT
TTGCTCAGAGACTCAGAGATTTGCCCAAGGATCTTCCAGCTACCAACATC
AAGAGAGATGTTTCCCAGCTCATTGGAAGAACCCCGCTTGTGTTTCTTAA
CAAAGTCAGTGAAGGATGTGGAGCTTATATTGCTGTCAAGCAAGAAATGT
TCCAACCCACTGCTAGCATCAAGGACAGACCAGCAGTGGCCATGCTCGAA
GATGCAGAAAATAAAAACTTAATTTCTCCCGGAAAGACCACTATCATAGA
GCCCACGTCAGGGAACATGGGAATAAGCATGGCGTTTATGGCAGCAATGA
AAGGGTATAAGATGGTTCTAACTATGCCCTCTTATACAAGCTTGGAGAGG
AGAGTGACAATGAGAGCATTTGGAGCTGATTTAATCCTCACAGATCCAGC
CAAGGGGATGGGAGGAACTGTTAAGAAGGCTCAAGAACTTTTGGAATCCA
CACCAAATGCTTTCATGC
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