CN189202

Overview
NameCN189202
Unique NameCN189202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STAAN (Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  307 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKE 136          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STAAM (Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=cysK PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  307 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKE 136          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_STAAC (Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  307 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLE 696
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKE 136          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 63/142 (44.37%), Postives = 93/142 (65.49%), Query Frame = 1
Query:  292 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717
            + I  D S  IG TPLV LN++  G    I  K E   P+ S+K R    M+ DAE + ++ PG   ++EPTSGN GI++A++AA +GYK+ LTMP   S+ERR  ++A GA+L+LT+ AKGM G ++KA+E++ S P  ++
Sbjct:    2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYL 139          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 63/142 (44.37%), Postives = 93/142 (65.49%), Query Frame = 1
Query:  292 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717
            + I  D S  IG TPLV LN++  G    I  K E   P+ S+K R    M+ DAE + ++ PG   ++EPTSGN GI++A++AA +GYK+ LTMP   S+ERR  ++A GA+L+LT+ AKGM G ++KA+E++ S P  ++
Sbjct:    2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYL 139          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 63/142 (44.37%), Postives = 93/142 (65.49%), Query Frame = 1
Query:  292 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717
            + I  D S  IG TPLV LN++  G    I  K E   P+ S+K R    M+ DAE + ++ PG   ++EPTSGN GI++A++AA +GYK+ LTMP   S+ERR  ++A GA+L+LT+ AKGM G ++KA+E++ S P  ++
Sbjct:    2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYL 139          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27
Identity = 63/142 (44.37%), Postives = 93/142 (65.49%), Query Frame = 1
Query:  292 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717
            + I  D S  IG TPLV LN++  G    I  K E   P+ S+K R    M+ DAE + ++ PG   ++EPTSGN GI++A++AA +GYK+ LTMP   S+ERR  ++A GA+L+LT+ AKGM G ++KA+E++ S P  ++
Sbjct:    2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYL 139          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSM_BACSU (Probable cysteine synthase OS=Bacillus subtilis GN=ytkP PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.139e-26
Identity = 62/140 (44.29%), Postives = 91/140 (65.00%), Query Frame = 1
Query:  298 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717
            I  + + LIG TPLV LN++     A + +K E F P+ S+KDR A  M+ +AE   L+ PG + IIEPTSGN GI +A  AA +GYK +L MP   + ER   ++A+GA+++LT   + M G++KKA+EL E  PN+++
Sbjct:    4 IVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLKPG-SVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMTKERINLLKAYGAEVVLTPGEERMPGSIKKAKELAEQIPNSYI 142          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSM_CAMJE (Cysteine synthase B OS=Campylobacter jejuni GN=cysM PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23
Identity = 64/140 (45.71%), Postives = 82/140 (58.57%), Query Frame = 1
Query:  298 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717
            +   VS+LIG TP++ L K     G  +  K E   P+ SIKDR A  M++DA +   I+   TTI+E TSGN GIS+A + A  G K +  MP   SLERR  +  FGA L LT    GM G V KA E+L +TPN+FM
Sbjct:    3 VHEKVSELIGNTPIIHLKKF----GINVFAKCEFLNPSHSIKDRAAFEMIKDALDSKKINQD-TTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMITLFGARLELTPANLGMKGAVDKANEILLNTPNSFM 137          
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSM_SALTY (Cysteine synthase B OS=Salmonella typhimurium GN=cysM PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.702e-22
Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1
Query:  310 VSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGG 666
            + Q IG TPLV L ++    G+ I VK E   P  S+KDR A++M+ +AE +  I PG   +IE TSGN GI++A +AA+KGY+M L MP   S ERR  MRA+GA+LIL    +GM G
Sbjct:    4 LEQTIGNTPLVKLQRLGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDV-LIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEG 121          
The following BLAST results are available for this feature:
BLAST of CN189202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CYSK_STAAN2.997e-2750.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAM2.997e-2750.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAC2.997e-2750.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_SALTY5.113e-2744.37Cysteine synthase A OS=Salmonella typhimurium GN=c... [more]
CYSK_SALTI5.113e-2744.37Cysteine synthase A OS=Salmonella typhi GN=cysK PE... [more]
CYSK_ECOLI5.113e-2744.37Cysteine synthase A OS=Escherichia coli (strain K1... [more]
CYSK_ECO575.113e-2744.37Cysteine synthase A OS=Escherichia coli O157:H7 GN... [more]
CYSM_BACSU1.139e-2644.29Probable cysteine synthase OS=Bacillus subtilis GN... [more]
CYSM_CAMJE9.978e-2345.71Cysteine synthase B OS=Campylobacter jejuni GN=cys... [more]
CYSM_SALTY1.702e-2248.74Cysteine synthase B OS=Salmonella typhimurium GN=c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H17_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189202 ID=CN189202; Name=CN189202; organism=Citrus sinensis; type=EST; length=718bp
GAGGCATCACCACACTCAGAGCCTTAATTTGTTATCCGCTGCAAGTGCTG
GTGGAAGTGGGAGTGGTTCTTGTAAAGAGTGAATTATTATTTTTGCTCAA
ATTTAAAGTTCCTCCTCCAACCTCCATTATTATTAAAAATGGCTGCTGCT
TTGAGGAGTTTCTTGAAGAAAAGAGCCTTAACATGCAGCGAACCCATGTT
GATGAGAAGACTGGTCTCCTCACAGCCGGCGCCGGTTGATTCTTCATCTT
TTGCTCAGAGACTCAGAGATTTGCCCAAGGATCTTCCAGCTACCAACATC
AAGAGAGATGTTTCCCAGCTCATTGGAAGAACCCCGCTTGTGTTTCTTAA
CAAAGTCAGTGAAGGATGTGGAGCTTATATTGCTGTCAAGCAAGAAATGT
TCCAACCCACTGCTAGCATCAAGGACAGACCAGCAGTGGCCATGCTCGAA
GATGCAGAAAATAAAAACTTAATTTCTCCCGGAAAGACCACTATCATAGA
GCCCACGTCAGGGAACATGGGAATAAGCATGGCGTTTATGGCAGCAATGA
AAGGGTATAAGATGGTTCTAACTATGCCCTCTTATACAAGCTTGGAGAGG
AGAGTGACAATGAGAGCATTTGGAGCTGATTTAATCCTCACAGATCCAGC
CAAGGGGATGGGAGGAACTGTTAAGAAGGCTCAAGAACTTTTGGAATCCA
CACCAAATGCTTTCATGC
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