CN189202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 322 IGRTPLVFLNKVSEGCGAYIAV--KQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFM 717 IGRTP+ + A+ K E P S+KDR ++++A I+ TTIIEPT+GN GI++A +A K + +P S E++ MRA GA +I T ++G+ G +KK++EL ES P++++ Sbjct: 10 IGRTPIFKFTRKDYPIPLKSAIYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKIT-STTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYL 142
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_YEAST (Putative cysteine synthase OS=Saccharomyces cerevisiae GN=YGR012W PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13 Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 259 RLRDLPKDLPATNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKT-TIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADL------ILTDPAKGMGGTVKKAQELLES 699 + RD+P+ K V +LIG TPLV + +++ G I K E+ P S KDR A+ +++ AE + G+ + E TSG+ GIS+A + GY+ +++P TSLE+ + + GA + + DP + + K EL +S Sbjct: 38 KTRDIPRP------KEGVEELIGNTPLVKIRSLTKATGVNIYAKLELCNPAGSAKDRVALNIIKTAEELGELVRGEPGWVFEGTSGSTGISIAVVCNALGYRAHISLPDDTSLEKLALLESLGATVNKVKPASIVDPNQYVNAAKKACNELKKS 185
BLAST of CN189202 vs. ExPASy Swiss-Prot
Match: CYSK_DICDI (Cysteine synthase OS=Dictyostelium discoideum GN=cysK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 292 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGM 660 + I + + +G TPL+ + +SE G I K E P S KDR A ++ D E K L+ G +TI+E T+G+ GIS+ + +GY + L +P S E+ + GA+ + P GM Sbjct: 36 SGISNGIIETVGNTPLIRIKSLSEATGCEIYGKAEFMNPGGSPKDRVAREIILDGEKKGLLKKG-STIVEATAGSTGISLTMLGKSRGYNVQLFIPDNVSKEKVDLLEMLGAETKIV-PIVGM 156 The following BLAST results are available for this feature:
BLAST of CN189202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189202 ID=CN189202; Name=CN189202; organism=Citrus sinensis; type=EST; length=718bpback to top |