CN189201

Overview
NameCN189201
Unique NameCN189201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.329e-18
Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = -2
Query:  276 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLFQEL 617
            P VK+  VEP  S  L+GG+ GPH I G G GF P +L+  + + + +V ++ A + AR +A KEG++VGIS GA   +AL+L   P  +GKL V +   +G   LS  LF +L
Sbjct:  196 PEVKVVAVEPEASPVLSGGEKGPHPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSALQLAKQPENEGKLIVVLLPSYGERYLSTPLFADL 309          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAES (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.637e-17
Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PNV+I  +EP  S  L+GG+PGPH + G G GF PD L+ +V + + +V +D A+ MAR +A +EG++ GIS GA   AA++     G KGK  VTV    G   LS  L+
Sbjct:  197 PNVEIVAIEPEASPVLSGGEPGPHKLQGLGAGFVPDTLNTEVYDSIIKVGNDTAMDMARRVAREEGILAGISSGAAIYAAIQKAKELG-KGKTVVTVLPSNGERYLSTPLY 306          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAEQ (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.637e-17
Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PNV+I  +EP  S  L+GG+PGPH + G G GF PD L+ +V + + +V +D A+ MAR +A +EG++ GIS GA   AA++     G KGK  VTV    G   LS  L+
Sbjct:  197 PNVEIVAIEPEASPVLSGGEPGPHKLQGLGAGFVPDTLNTEVYDSIIKVGNDTAMDMARRVAREEGILAGISSGAAIYAAIQKAKELG-KGKTVVTVLPSNGERYLSTPLY 306          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAHA (Cysteine synthase (Fragment) OS=Staphylococcus haemolyticus GN=cysK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PN++I  +EP  S  L+GG+PGPH + G G GF PD L+ D+ + + +V +D A++ +R +A +EG++ GIS GA   AA++     G KGK  +TV    G   LS  L+
Sbjct:   42 PNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFVPDTLNTDIYDSIIQVGNDIAMETSRRVAKEEGILAGISSGAAIHAAIQKAKELG-KGKTVLTVLPSNGERYLSTPLY 151          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAAW (Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PN++I  +EP  S  L+GG+PGPH + G G GF P  L+ ++ + + +V +D A++M+R +A +EG++ GIS GA   AA++     G KGK  VTV    G   LS  L+
Sbjct:  197 PNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELG-KGKTVVTVLPSNGERYLSTPLY 306          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAAS (Cysteine synthase OS=Staphylococcus aureus (strain MSSA476) GN=cysK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PN++I  +EP  S  L+GG+PGPH + G G GF P  L+ ++ + + +V +D A++M+R +A +EG++ GIS GA   AA++     G KGK  VTV    G   LS  L+
Sbjct:  197 PNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELG-KGKTVVTVLPSNGERYLSTPLY 306          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAAR (Cysteine synthase OS=Staphylococcus aureus (strain MRSA252) GN=cysK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PN++I  +EP  S  L+GG+PGPH + G G GF P  L+ ++ + + +V +D A++M+R +A +EG++ GIS GA   AA++     G KGK  VTV    G   LS  L+
Sbjct:  197 PNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELG-KGKTVVTVLPSNGERYLSTPLY 306          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAAN (Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PN++I  +EP  S  L+GG+PGPH + G G GF P  L+ ++ + + +V +D A++M+R +A +EG++ GIS GA   AA++     G KGK  VTV    G   LS  L+
Sbjct:  197 PNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELG-KGKTVVTVLPSNGERYLSTPLY 306          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAAM (Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=cysK PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PN++I  +EP  S  L+GG+PGPH + G G GF P  L+ ++ + + +V +D A++M+R +A +EG++ GIS GA   AA++     G KGK  VTV    G   LS  L+
Sbjct:  197 PNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELG-KGKTVVTVLPSNGERYLSTPLY 306          
BLAST of CN189201 vs. ExPASy Swiss-Prot
Match: CYSK_STAAC (Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -2
Query:  285 PNVKIFGVEPAESNFLNGGKPGPHFITGKGVGFKPDILDMDVMEKVFEVCSDDAVKMARELALKEGVMVGISFGANTVAALRLVSMPGKKGKLFVTVHGGFGGGNLSFVLF 617
            PN++I  +EP  S  L+GG+PGPH + G G GF P  L+ ++ + + +V +D A++M+R +A +EG++ GIS GA   AA++     G KGK  VTV    G   LS  L+
Sbjct:  197 PNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKELG-KGKTVVTVLPSNGERYLSTPLY 306          
The following BLAST results are available for this feature:
BLAST of CN189201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CYSK_NEIMB7.329e-1842.11Cysteine synthase OS=Neisseria meningitidis serogr... [more]
CYSK_STAES3.637e-1744.14Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAEQ3.637e-1744.14Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAHA6.860e-1640.54Cysteine synthase (Fragment) OS=Staphylococcus hae... [more]
CYSK_STAAW6.860e-1640.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAS6.860e-1640.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAR6.860e-1640.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAN6.860e-1640.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAM6.860e-1640.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAC6.860e-1640.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189201 ID=CN189201; Name=CN189201; organism=Citrus sinensis; type=EST; length=621bp
TTTTTTTTTTTTTTTTTAAAATTCAAAATTCCAAGTATTTAAATTCAAAA
TTCCAAATACCCCAACTGCAAAAAATCATTTTCATTTTCATTTTTATTCT
TAAAAAAAACAAATTGAAACAATACCAAACGGGCCTAAACTATCTGAAGG
GATCAAATTTCATACAAATAAAGTTCAACAAGCAAATTTGATACAAGTTC
ACCTTTCTAAAAAACAACCCCCATATACAAGCATTATTCAACTGAAACTG
GTTGCATGTTCCCACCTTCTTTCCTGAGTTCTTGAAACAAAACAAATGAC
AAGTTTCCCCCCCCAAAGCCCCCATGAACAGTCACAAAAAGTTTGCCTTT
TTTCCCTGGCATGCTAACAAGTCTTAGGGCTGCCACTGTATTGGCCCCAA
ATGATATTCCAACCATAACCCCTTCCTTCAATGCCAGTTCCCTGGCCATT
TTTACTGCATCGTCACTACAAACCTCAAAAACCTTTTCCATCACATCCAT
GTCTAGAATATCGGGTTTGAACCCAACCCCCTTGCCAGTAATGAAATGAG
GACCTGGTTTGCCCCCATTCAAAAAATTACTTTCAGCCGGTTCCACCCCA
AAGATCTTAACATTAGGATTT
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