CX676022

Overview
NameCX676022
Unique NameCX676022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.501e-26
Identity = 69/186 (37.10%), Postives = 107/186 (57.53%), Query Frame = 2
Query:  119 KKFLLVLDDVWNE-DYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHVISVNVLSEMECWSVFQSLAISGKTIGKRENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQNI---LENEIWELEAIEKGLLAPLLLSYNELPS-KVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYL 661
            KKF+L+LDD+W+E D  K        +N    SKI+ TTR + V R M     + V+ L   E W +FQ   +    +   E++  + R++ +KC GLPLA   I   + S+ T +EWQ++   L +   E  ++E+ +L  L  SY++L   KVK CF YC++FP+DY +RK +LIE WM +G++
Sbjct:  325 KKFVLLLDDLWSEVDLEKIGVPPLTRENG---SKIVFTTRSKDVCRDMEVDGEMKVDCLPPDEAWELFQK-KVGPIPLQSHEDIPTLARKVAEKCCGLPLALSVIGKAMASRETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCFLYCSLFPEDYEVRKEELIEYWMCEGFI 506          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: DRL27_ARATH (Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.448e-24
Identity = 69/229 (30.13%), Postives = 120/229 (52.40%), Query Frame = 2
Query:    5 FDEFRIARAIIESLTPGSAKDLVEFQSLMQHIEECVAGKKFLLVLDDVWNEDYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHVISVNVLSEMECWSVFQSLAISGKTIGKRENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQNILEN---EIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKE 682
            FD   + + I E L   +  +  E +   +     +  +KFLL+LDDVW           +  +N    SK+++T+R   V R M +   + V+ L E + W +F   A     + + +++ KI + + ++C GLPLA  T+ + +R K   K W ++L      +  +++IE+ +  PL LSY+ L  K K CF  CA+FP+DY I   +++  WMA+G++ E G++E
Sbjct:  209 FDPREVQKQIAERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENK--GSKVILTSRFLEVCRSMKTDLDVRVDCLLEEDAWELFCKNA---GDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKLSYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQE 432          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: DRL37_ARATH (Probable disease resistance protein At5g47250 OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 72/203 (35.47%), Postives = 112/203 (55.17%), Query Frame = 2
Query:  122 KFLLVLDDVWNEDYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHVISVNVLSEMECWSVFQSLAISGKTIGKRENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQ---NILENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEK-GAKEMEDIGEEYFNIL 718
            +F+L+LDD+W ED          L       K++ TTR + V  +M +   I V  LSE + W +F    +     G  E +  I ++IV KC GLPLA + I   + SK+T  +W+   + LE+   E++  EKG+   L LSY+ L +K  +CF YCA+FPK Y I++ +L+E W+ +G++ EK G +  +D G E  + L
Sbjct:  261 RFVLLLDDLW-EDVSLTAIGIPVLGKKY---KVVFTTRSKDVCSVMRANEDIEVQCLSENDAWDLFD---MKVHCDGLNE-ISDIAKKIVAKCCGLPLALEVIRKTMASKSTVIQWRRALDTLESYRSEMKGTEKGIFQVLKLSYDYLKTKNAKCFLYCALFPKAYYIKQDELVEYWIGEGFIDEKDGRERAKDRGYEIIDNL 455          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: DRL8_ARATH (Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24
Identity = 78/259 (30.12%), Postives = 126/259 (48.65%), Query Frame = 2
Query:    5 FDEFRIARAIIESLTPGSAKDLV---EFQSLMQHIEECVAGKKFLLVLDDVWNE-DYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHV-ISVNVLSEMECWSVFQSLA---ISGKTIGKRENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQNILENEIWEL-------EAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEK--GAKEMEDIGEEYFNILASRS 730
            F    + + I+++LT    KD +   E   L   + + +   K L+V DD+W E D+    P +   K      K+LIT+R ET+A      +V      L+ +E W +FQ +A   +        + +E +G++++K C GLPLA K +  LL +K T  +W+ + EN    +       +     +   L LS+ ELPS +K CF Y A FP+D+ I+  KL   W A+G L  +    + + D+GE Y   L  R+
Sbjct:  226 FTRKNVWQMILQNLTSRETKDEILQMEEAELHDELFQLLETSKSLIVFDDIWKEEDWGLINPIFPPKKGW----KVLITSRTETIAMHGNRRYVNFKPECLTILESWILFQRIAMPRVDESEFKVDKEMEMMGKQMIKYCGGLPLAVKVLGGLLAAKYTFHDWKRLSENIGCHIVGRTDFSDGNNSSVYHVLSLSFEELPSYLKHCFLYLAHFPEDHNIKVEKLSYCWAAEGILEPRHYHGQTIRDVGESYIEELVRRN 480          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: DRL32_ARATH (Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24
Identity = 66/187 (35.29%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  119 KKFLLVLDDVWNE-DYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHVISVNVLSEMECWSVFQSLAISGKTIGKRENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQ---NILENEIWELEAIEKGLLAPLLLSYNELPS-KVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLS 664
            KKF+L+LDD+W+E D  K        +N    SKI+ TTR + V + M +   I V+ LS  E W +F+ L +    +   +++  + R +  KC GLPLA   I   +  K T +EW+   N+L +   +   +E+ +L  L  SY+ L + ++K CF YC++FP+D+ I K KLIE W+ +GY++
Sbjct:  253 KKFVLLLDDLWSEVDLIKIGVPPPSRENG---SKIVFTTRSKEVCKHMKADKQIKVDCLSPDEAWELFR-LTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMVCKETVQEWRHAINVLNSPGHKFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDFEIEKDKLIEYWICEGYIN 435          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: DRL23_ARATH (Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.186e-24
Identity = 62/200 (31.00%), Postives = 109/200 (54.50%), Query Frame = 2
Query:   98 IEECVAGKKFLLVLDDVWNE-DYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHVISVNVLSEMECWSVFQSLAISGKTIGKRENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQN---ILENEIWELEAIEKGLLAPLLLSYNELPSK-VKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKE 682
            I  C++ K+F+L+LDD+W + D  K     +  +N   + K++ TTR   V   MG    + V  LS  + W +FQ   +   ++G   ++ ++ +++  KC+GLPLA   I   +  K   +EW +   +L +   E   ++  +L  L  SY+ L  K V+ CF YCA++P+DY I+K++LI+ W+ +G++     KE
Sbjct:  248 ILNCLSKKRFVLLLDDIWKKVDLTKIGIPSQTREN---KCKVVFTTRSLDVCARMGVHDPMEVQCLSTNDAWELFQE-KVGQISLGSHPDILELAKKVAGKCRGLPLALNVIGETMAGKRAVQEWHHAVDVLTSYAAEFSGMDDHILLILKYSYDNLNDKHVRSCFQYCALYPEDYSIKKYRLIDYWICEGFIDGNIGKE 443          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23
Identity = 62/199 (31.16%), Postives = 106/199 (53.27%), Query Frame = 2
Query:   98 IEECVAGKKFLLVLDDVWNEDYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHVISVNVLSEMECWSVFQSLAISGKTIGKRENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQN---ILENEIWELEAIEKGLLAPLLLSYNELPSKV-KRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKE 682
            I   +  +KF+L+LDD+W +   K        K++    K+  TTR   V   MG    + V+ L   E W +FQ + +   T+G   ++  + R++ +KC+GLPLA   I   +  K T  EW +   +L +   +   +E  +L  L  SY+ L  ++ K CF YC++FP+DY I K  L++ W+++G+++EK  +E
Sbjct:  251 IHNVLRRRKFVLLLDDIWEKVNLKAVGVPYPSKDN--GCKVAFTTRSRDVCGRMGVDDPMEVSCLQPEESWDLFQ-MKVGKNTLGSHPDIPGLARKVARKCRGLPLALNVIGEAMACKRTVHEWCHAIDVLTSSAIDFSGMEDEILHVLKYSYDNLNGELMKSCFLYCSLFPEDYLIDKEGLVDYWISEGFINEKEGRE 446          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23
Identity = 65/205 (31.71%), Postives = 109/205 (53.17%), Query Frame = 2
Query:  119 KKFLLVLDDVWNE-DYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHVISVNVLSEMECWSVFQSLAISGKTIGKRENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQN---ILENEIWELEAIEKGLLAPLLLSYNELPSK-VKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNIL 718
            K+F+L+LDD+W++ D  +    +   +N     KI+ TTR + +   MG    + V  L+  + W +F    +   T+G    +  + R + KKC+GLPLA   I   +  K T +EW++   +L +   E   +E  +L  L  SY+ L S+ +K CF YCA+FP+D+ I K+ L++ W+ +G++     K  E+ G E   IL
Sbjct:  256 KRFVLLLDDIWSKVDLTEVGVPFPSRENGC---KIVFTTRLKEICGRMGVDSDMEVRCLAPDDAWDLFTK-KVGEITLGSHPEIPTVARTVAKKCRGLPLALNVIGETMAYKRTVQEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDNLKSEQLKLCFQYCALFPEDHNIEKNDLVDYWIGEGFIDRNKGK-AENQGYEIIGIL 455          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: RX24L_ARATH (Probable disease resistance protein RXW24L OS=Arabidopsis thaliana GN=RXW24L PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.091e-23
Identity = 81/258 (31.40%), Postives = 134/258 (51.94%), Query Frame = 2
Query:    5 FDEFRIARAIIESLTPGSAKDLVEFQS---LMQHIEECVAGKKFLLVLDDVWNE-DYYKWEPFYKCLKNSLHESKILITTRKETVARIMGSTHVISVN--VLSEMECWSVFQSLAISGKTIGK---RENLEKIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQNILEN---EIWELEAIEKGLLAPLL-LSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEK---GAKEMEDIGEEYFNILASRS 730
            F    + + I+++LT    KD ++      L   +   +   K L+VLDD+W E D+   +P +   K      K+L+T+R E++A + G T  IS     LS  + W++FQS+A+  K   +    E +E +G++++K C GL LA K +  LL +K T  +W+ + EN    I E  +     +  +L +S+ ELP+ +K CF Y A FP+D+ I   KL   W A+G +SE+     + + D G+ Y   L  R+
Sbjct:  224 FTRISVWQTILQNLTSKERKDEIQNMKEADLHDDLFRLLESSKTLIVLDDIWKEEDWDLIKPIFPPKKGW----KVLLTSRTESIA-MRGDTTYISFKPKCLSIPDSWTLFQSIAMPRKDTSEFKVDEEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLHDWKRLSENIGSHIVERTSGNNSSIDHVLSVSFEELPNYLKHCFLYLAHFPEDHEIDVEKLHYYWAAEG-ISERRRYDGETIRDTGDSYIEELVRRN 475          
BLAST of CX676022 vs. ExPASy Swiss-Prot
Match: DRL4_ARATH (Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.731e-23
Identity = 78/240 (32.50%), Postives = 124/240 (51.67%), Query Frame = 2
Query:   80 QSLMQHIEECVAGKKFLLVLDDVWNEDYYKWEPFYKCLKNSL-HE--SKILITTRKETVARIMGSTHVI-SVNVLSEMECWSVFQSLAISGKTIGKRENLE--------KIGREIVKKCKGLPLAAKTIASLLRSKNTEKEWQNILEN------EIWELEAIEKGLLAPLL-LSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYL----SEKGAKEMEDIGEEYFNILASRS 730
            + L + +   +   K L+VLDD+W +D   W+    CLK+   HE  S+I++TTR + VA       V+    +L+  E W + + +++SG     REN+E        +IG++IV +C GLPLA   +  LL +K+T  EWQ + EN              +  L+A +L LSY  LP  VK+CF Y A +P+DY +    L+   +A+G +      +    +ED+G++Y   L  RS
Sbjct:  255 EQLGEELHRFLKRNKCLIVLDDIWGKD--AWD----CLKHVFPHETGSEIILTTRNKEVALYADPRGVLHEPQLLTCEESWELLEKISLSG-----RENIEPMLVKKMEEIGKQIVVRCGGLPLAITVLGGLLATKSTWNEWQRVCENIKSYVSNGGSSNGSKNMLVADVLCLSYEYLPPHVKQCFLYFAHYPEDYEVHVGTLVSYCIAEGMVMPVKHTEAGTTVEDVGQDYLEELVKRS 483          
The following BLAST results are available for this feature:
BLAST of CX676022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
DRL3_ARATH4.501e-2637.10Probable disease resistance protein At1g15890 OS=A... [more]
DRL27_ARATH1.448e-2430.13Disease resistance protein At4g27190 OS=Arabidopsi... [more]
DRL37_ARATH1.891e-2435.47Probable disease resistance protein At5g47250 OS=A... [more]
DRL8_ARATH2.470e-2430.12Putative disease resistance protein At1g58400 OS=A... [more]
DRL32_ARATH3.226e-2435.29Probable disease resistance protein At5g43730 OS=A... [more]
DRL23_ARATH7.186e-2431.00Putative disease resistance protein At4g10780 OS=A... [more]
RPS5_ARATH1.226e-2331.16Disease resistance protein RPS5 OS=Arabidopsis tha... [more]
DRL40_ARATH1.226e-2331.71Probable disease resistance protein At5g63020 OS=A... [more]
RX24L_ARATH2.091e-2331.40Probable disease resistance protein RXW24L OS=Arab... [more]
DRL4_ARATH2.731e-2332.50Putative disease resistance protein At1g50180 OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_66E02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66E02-J4-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676022 ID=CX676022; Name=CX676022; organism=Citrus sinensis; type=EST; length=735bp
GCCATTTGATGAGTTCAGGATTGCCAGAGCAATCATTGAGTCTCTAACGC
CGGGTTCTGCCAAAGACCTTGTAGAGTTTCAATCTCTCATGCAACATATT
GAAGAATGTGTTGCCGGGAAGAAATTTCTTCTTGTCTTAGACGACGTGTG
GAATGAAGATTACTATAAGTGGGAACCATTCTACAAATGTTTAAAGAATA
GTCTCCATGAAAGTAAAATTTTAATTACCACACGTAAAGAAACAGTTGCC
CGTATTATGGGATCAACTCATGTTATCTCTGTCAATGTATTGTCTGAAAT
GGAATGCTGGTCGGTGTTTCAGTCGTTGGCAATTTCTGGTAAGACCATAG
GAAAACGTGAAAATTTAGAAAAAATTGGTAGAGAAATTGTAAAAAAGTGC
AAGGGCTTACCTTTAGCTGCAAAGACAATTGCTAGTCTCTTGCGATCTAA
AAACACTGAAAAAGAATGGCAAAATATCTTAGAGAATGAGATATGGGAAC
TAGAAGCAATTGAGAAAGGCCTTTTAGCCCCTCTATTGTTGAGTTACAAT
GAATTACCCTCCAAGGTAAAGCGTTGTTTCTCATATTGTGCCGTCTTTCC
GAAAGACTATGGAATACGGAAGCATAAGTTAATTGAACTATGGATGGCAC
AAGGTTATCTTAGTGAGAAAGGAGCCAAAGAGATGGAGGATATTGGTGAA
GAGTATTTCAACATCTTAGCTAGCCGTTCATTCTT
back to top