CX676021

Overview
NameCX676021
Unique NameCX676021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: DRL27_ARATH (Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.456e-15
Identity = 81/272 (29.78%), Postives = 131/272 (48.16%), Query Frame = -1
Query:    9 KEWQNILEN---EIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIY-KCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILH--LLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTN-IEKLLHLKYLNLKGQKKIEKLPE-TLCELYNLERLNVDDCQNL 800
            K W ++L      +  +++IE+ +  PL LSY+ L  K K CF  CA+FP+DY I   +++  WMA+G++ E G++  ED   E    + S    +D+   +DG+     KMHD+V DFA ++ S+     + HS   L +S    + I    L  +LRR     +S+  N                     E LP L E+  C++   L ++     N L+KE+P   ++    L+ LNL G  +I+  P  +L  L++L  L + DC  L
Sbjct:  356 KLWNHVLSKLSKSVPWIKSIEEKIFQPLKLSYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQ--EDSMNEGITTVES---LKDYCLLEDGDRRDTVKMHDVVRDFAIWIMSSS--QDDSHS---LVMSGTGLQDIRQDKLAPSLRR-----VSLMNN-------------------KLESLPDLVEEF-CVKTSVLLLQ----GNFLLKEVPIGFLQAFPTLRILNLSG-TRIKSFPSCSLLRLFSLHSLFLRDCFKL 587          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: R1B17_SOLDE (Putative late blight resistance protein homolog R1B-17 OS=Solanum demissum GN=R1B-17 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14
Identity = 70/258 (27.13%), Postives = 118/258 (45.74%), Query Frame = -1
Query:   33 ENEIWELEA------IEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYD-DGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKS-DEYSWSSEV-LPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERL 779
            E E WE  A      I     A +  SY+ LP  +K CF Y   F +D  I   +LI LW+++ ++     + +EDI E Y   L  R+      + D DG++  C++HD++ DF +   + E   + I+  +    + +  K+  HL  T        +  W     L G  S+L K+ D Y +S    +  +      L+ L+L+      R  +I  IPT   +L +L+YL+   ++    +P ++  L+NLE L
Sbjct:  753 EVECWEQVANNLGTHIHNDSRAIVNQSYHVLPCHLKSCFLYFGAFLEDEVIDISRLIRLWISESFIKSSEGRRLEDIAEGYLENLIGRNLVMVTQRADSDGKVKACRLHDVLLDFCKERAAEENFLLWINRDQISTKAVYSHKQHAHLAFTEMDN----LVEWSASCSLVG--SVLFKNPDSYLYSPAFSISLILLNFKFLKVLDLE------RQVVIDFIPT---ELFYLRYLSASIEQ--NSIPSSISNLWNLETL 993          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: DRL32_ARATH (Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14
Identity = 75/292 (25.68%), Postives = 129/292 (44.18%), Query Frame = -1
Query:   27 TEKEWQ---NILENEIWELEAIEKGLLAPLLLSYNELPS-KVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEM-EDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCS---NECLAVEIHSGEELA----------------ISSFVEK--------KILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNV 806
            T +EW+   N+L +   +   +E+ +L  L  SY+ L + ++K CF YC++FP+D+ I K KLIE W+ +GY++    ++   + G +   +L       +    D     K KMHD++ + A ++ S   N+   + + SG  +                 IS+ VEK         +  LLL   +   + +  +        +  L+V     +WS   LP+    L  L+ L L +         IK +P  ++KL  L YLNL+    +E L      L NL+ L +
Sbjct:  362 TVQEWRHAINVLNSPGHKFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDFEIEKDKLIEYWICEGYINPNRYEDGGTNQGYDIIGLLVRAHLLIECELTD-----KVKMHDVIREMALWINSDFGNQQETICVKSGAHVRLIPNDISWEIVRQMSLISTQVEKIACSPNCPNLSTLLLPYNKLVDISVGFF------LFMPKLVVLDLSTNWSLIELPEEISNLGSLQYLNLSLTG-------IKSLPVGLKKLRKLIYLNLEFTNVLESLVGIATTLPNLQVLKL 635          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: R13L3_ARATH (Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.032e-13
Identity = 61/231 (26.41%), Postives = 113/231 (48.92%), Query Frame = -1
Query:   30 LSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLN 722
            LS+ E+  ++K CF Y +VFP+DY I+  KLI L +A+G++ E     MED+   Y + L  RS  +   + + G++  C++HD++ D A    + E   V +++ E+   S    ++++H L+         ++        + +RS L   +   +       L  KL  LR L ++    +   N+   +P  I +L+HL+YL +     +  LP ++  L  L+ L+
Sbjct:  408 LSFKEMRHELKLCFLYFSVFPEDYEIKVEKLIHLLVAEGFIQEDEEMMMEDVARCYIDELVDRSLVK-AERIERGKVMSCRIHDLLRDLA-IKKAKELNFVNVYN-EKQHSSDICRREVVHHLMNDYYLCDRRVN--------KRMRSFLFIGERRGFGYVNTTNL--KLKLLRVLNME-GLLFVSKNISNTLPDVIGELIHLRYLGI-ADTYVSILPASISNLRFLQTLD 623          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: R1B12_SOLDE (Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum GN=R1B-12 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13
Identity = 68/249 (27.31%), Postives = 115/249 (46.18%), Query Frame = -1
Query:    6 SYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYD-DGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFV--EKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKS-------DEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLK-GQKKIEKLPETLCELYNLERLNVDDCQNLR 719
            SY+ LP  +K CF Y   F +D  I   +LI LW+++ ++     + +EDI E Y   L  R+      + + DG++  C++HD++ DF +   + E   + I   +    SS V   K+  HL  T        +  W     L G  S+L K+       +  S  +  + ++      L+ L+L+          I  IPT   +LL+L+YL+ + GQ  I   P ++  L+NLE L + D + +R
Sbjct:  805 SYHVLPFHLKSCFLYFGAFLEDRVINVSRLIRLWISESFIKSCEGRRLEDIAEGYLENLIGRNLVMVTQRANSDGKVKACRLHDVLLDFCKERAAEENFLLRIKWDQSTKPSSCVYSHKQHAHLAFT----GMDNLLEWSTSGSLVG--SVLFKNYDPNFAYNSCSSHAFAISRILPNFKFLKVLDLE------HQFFIDFIPT---ELLYLRYLSARIGQNSI---PSSISNLWNLETLILKDVRYMR 1035          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: R1B16_SOLDE (Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum GN=R1B-16 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.760e-13
Identity = 70/259 (27.03%), Postives = 120/259 (46.33%), Query Frame = -1
Query:   33 ENEIWELEA------IEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYD-DGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGA---SVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERL 779
            E E WE  A      I     A +  SY+ LP  +K CF Y   F +D  I   +LI LW+++ ++     + +EDI E Y   L  R+      + D DG++  C++HD++ DF +   + E   + I+  ++   + +  K+  HL  T        S   S+ G+V  L+      + S  +S S  +L   F     L+ L+L+         +I  IPT   +L +L+YL+ + ++    +P ++  L+NLE L
Sbjct:  751 EVECWEQVANNLGTHIHNDSRAIVNQSYHVLPCHLKSCFLYFGAFLEDEVIDISRLIRLWISESFIKSSEGRRLEDIAEGYLENLIGRNLVMVTQRADSDGKVKACRLHDVLLDFCKERAAEENFLLWINR-DQSTNAVYSHKRHAHLAFTEMDSLVEWSASCSLVGSVL-LKNYARRPLSSPAFSISHILLNFKF-----LKVLDLE------HQVVIDSIPT---ELFYLRYLSARIEQ--NSIPSSISNLWNLETL 991          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: R1B14_SOLDE (Putative late blight resistance protein homolog R1B-14 OS=Solanum demissum GN=R1B-14 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.760e-13
Identity = 71/257 (27.63%), Postives = 116/257 (45.14%), Query Frame = -1
Query:   33 ENEIWELEA------IEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYD-DGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKS-DEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERL 779
            E E WE  A      I     A +  SY+ LP  +K CF Y   F +D  I   +LI LW+++ ++     + +EDI E Y   L  R+      + D DG++  C++HD++ DF +   + E   + I+  +    + +  K+  HL  T        +  W     L G  S+L K+ D Y +S    P     L  L    L+V +      +I  IPT   +L +L+YL+   ++    +P ++  L+NLE L
Sbjct:  753 EVECWEQVANNLGTHIHNDSRAIVNQSYHVLPCHLKSCFLYFGAFLEDEVIDISRLIRLWISESFIKSSEGRRLEDIAEGYLENLIGRNLVMVTQRADSDGKVKACRLHDVLLDFCKERAAEENFLLWINRDQISTKAVYSHKQHAHLAFTEMDN----LVEWSASCSLVG--SVLFKNPDSYLYS----PAFSTSLILLNFKFLKVLD-LEHQVVIDFIPT---ELFYLRYLSASIEQ--NSIPSSISNLWNLETL 993          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: DRL40_ARATH (Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.299e-13
Identity = 69/274 (25.18%), Postives = 128/274 (46.72%), Query Frame = -1
Query:   24 TEKEWQN---ILENEIWELEAIEKGLLAPLLLSYNELPSK-VKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLAVE---IHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRG------LRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVD 806
            T +EW++   +L +   E   +E  +L  L  SY+ L S+ +K CF YCA+FP+D+ I K+ L++ W+ +G++     K  E+ G E   IL       + N+         KMHD+V + A ++ S+     E   + +G +      +EK  +   ++L         ++ N+  +R       L +LL++    ++   +    F  +  L  L+L +      N  ++ +P  I + + L+YL+L  + +I   P  L EL  L  LN++
Sbjct:  365 TVQEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDNLKSEQLKLCFQYCALFPEDHNIEKNDLVDYWIGEGFIDRNKGK-AENQGYEIIGILVRSCLLMEENQ------ETVKMHDVVREMALWIASDFGKQKENFIVQAGLQSRNIPEIEKWKVARRVSL---------MFNNIESIRDAPESPQLITLLLRK---NFLGHISSSFFRLMPMLVVLDLSM------NRDLRHLPNEISECVSLQYLSL-SRTRIRIWPAGLVELRKLLYLNLE 612          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: R1A_SOLDE (Late blight resistance protein R1-A OS=Solanum demissum GN=R1A PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.689e-13
Identity = 63/235 (26.81%), Postives = 105/235 (44.68%), Query Frame = -1
Query:   33 SYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNK-YDDGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFV--EKKILHLLLTLRRGA---SVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERL 719
            SY+ LP  +K CF Y   F +D  I   +LI LW+++ ++     + +EDI E Y   L  R+      +   DG+  +C++HD++ DF +   + E   + I+  +    SS V   K+  HL  T        S   S  G+V       S     D  S     + ++      L+ L+L+ R        I  IPT   +L++LKY +   ++    +P ++  L+NLE L
Sbjct:  782 SYHVLPCHLKSCFLYFGAFLEDRVIDISRLIRLWISEAFIKSSEGRRLEDIAEGYLENLIGRNLVMVTQRSISDGKAKECRLHDVLLDFCKERAAEENFLLWINRDQITKPSSCVYSHKQHAHLAFTEMHNLVEWSASCSFVGSVVLSNKYDSYFSTRDISSLHDFSISRILPNFKFLKVLDLEHRV------FIDFIPT---ELVYLKYFSAHIEQ--NSIPSSISNLWNLETL 1005          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: DRL28_ARATH (Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.689e-13
Identity = 72/258 (27.91%), Postives = 119/258 (46.12%), Query Frame = -1
Query:   39 KEWQNILENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGE-IYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQ-VRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLP--ETLCELYNLE 800
            K   N+L+     ++  EK +   L LSY+ L   +K CF +CA+FP+DY I+  +LI  W+A+G L   G    ED+  E   ++      +D    +DG+     KMHD+V DFA +  S++             +  F + K +  +  +   A+    +  NV  + G+ +L++     S   EV     +    LR L+L  VR        I+ +P +   L  L+ L L+  KK+  LP  E+L +L  L+
Sbjct:  329 KHTLNLLKRSAPSIDTEEK-IFGTLKLSYDFLQDNMKSCFLFCALFPEDYSIKVSELIMYWVAEGLLD--GQHHYEDMMNEGVTLVER---LKDSCLLEDGDSCDTVKMHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQDKFVSSVQRVSLMANKLERLPNNV--IEGVETLVLLLQGNSHVKEVPNGFLQAFPNLRILDLSGVR--------IRTLPDSFSNLHSLRSLVLRNCKKLRNLPSLESLVKLQFLD 570          
The following BLAST results are available for this feature:
BLAST of CX676021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DRL27_ARATH2.456e-1529.78Disease resistance protein At4g27190 OS=Arabidopsi... [more]
R1B17_SOLDE4.632e-1427.13Putative late blight resistance protein homolog R1... [more]
DRL32_ARATH6.050e-1425.68Probable disease resistance protein At5g43730 OS=A... [more]
R13L3_ARATH1.032e-1326.41Putative disease resistance RPP13-like protein 3 O... [more]
R1B12_SOLDE1.348e-1327.31Putative late blight resistance protein homolog R1... [more]
R1B16_SOLDE1.760e-1327.03Putative late blight resistance protein homolog R1... [more]
R1B14_SOLDE1.760e-1327.63Putative late blight resistance protein homolog R1... [more]
DRL40_ARATH2.299e-1325.18Probable disease resistance protein At5g63020 OS=A... [more]
R1A_SOLDE6.689e-1326.81Late blight resistance protein R1-A OS=Solanum dem... [more]
DRL28_ARATH6.689e-1327.91Probable disease resistance protein At4g27220 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_66E02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66E02-J4-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676021 ID=CX676021; Name=CX676021; organism=Citrus sinensis; type=EST; length=806bp
AATTCTCTAAGATTTTGACAATCATCAACGTTTAAACGTTCTAAATTATA
TAACTCACACAACGTCTCGGGTAATTTTTCTATCTTCTTTTGACCTTTCA
AATTAAGGTATTTCAAATGTAACAATTTTTCTATATTTGTTGGAATTTCC
TTGATTAAATTGTTACGCGGCCACGATTCACGCACCTGTAATTCTAATGC
CCTTAAACAAGTTAATTTTTCAAATAATTGAGGTAGAACTTCACTAGACC
ATGAATATTCATCACTTTTAACTAAGAGGCTCCGCAATCCTCGCAATCCT
GTAACATTACCCCAAATGGAAATCGGAACCGAAGCCCCCCTACGTAGAGT
TAACAGTAAATGAAGGATTTTTTTCTCCACGAAAGAGCTAATAGCTAACT
CTTCACCACTATGAATTTCTACTGCTAAACATTCATTACTACATAAATAT
TGGGCAAAGTCGTGCACTATATCATGCATTTTGCACTTATAGATTTCACC
ATCATCATATTTGTTAAAATCCTGAAAGAATGAACGGCTAGCTAAGATGT
TGAAATACTCTTCACCAATATCCTCCATCTCTTTGGCTCCTTTCTCACTA
AGATAACCTTGTGCCATCCATAGTTCAATTAACTTATGCTTCCGTATTCC
ATAGTCTTTCGGAAAGACGGCACAATATGAGAAACAACGCTTTACCTTGG
AGGGTAATTCATTGTAACTCAACAATAGAGGGGCTAAAAGGCCTTTCTCA
ATTGCTTCTAGTTCCCATATCTCATTCTCTAAGATATTTTGCCATTCTTT
TTCAGT
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