CX676018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_ECO24 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=msrB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.954e-15 Identity = 45/104 (43.27%), Postives = 55/104 (52.88%), Query Frame = -2 Query: 174 PRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 476 P TG DG Y+C C L+ S TK+DSGCGWP+FYE + R +R EI C C HLGHVF PT ER+CVNS S++F G+ Sbjct: 29 PPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_ALTMD (Peptide methionine sulfoxide reductase msrB OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=msrB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.954e-15 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = -2 Query: 186 DGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 440 DG Y C C L+ S TKFD+GCGWP+FY+ L G ++ D RR EI C CG HLGHVF PT +R+CVNS+S+ F Sbjct: 47 DGLYVCKCCEAPLFPSDTKFDAGCGWPSFYKQLDDGNVDYREDVSHGMRRVEIFCKQCGSHLGHVFPDG--PAPTGQRYCVNSLSMTF 132
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_ECO81 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O81 (strain ED1a) GN=msrB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.553e-15 Identity = 45/104 (43.27%), Postives = 55/104 (52.88%), Query Frame = -2 Query: 174 PRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 476 P TG DG Y+C C L+ S TK+DSGCGWP+FYE + R +R EI C C HLGHVF PT ER+CVNS S++F G+ Sbjct: 29 PPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PHPTGERYCVNSASLRFTDGE 130
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_BURTA (Peptide methionine sulfoxide reductase msrB OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=msrB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.553e-15 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = -2 Query: 186 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 467 TGEY G Y+C CGTAL++S K+ SGCGWP++++ + I+ D R E+ C CG HLGHVF+ +G + T R+C+NS ++ F Sbjct: 41 TGEYTDTEDAGIYHCVVCGTALFESGAKYHSGCGWPSYFKPIDAEVIDEKMDYTHGMTRVEVRCNQCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: YL56_CAEEL (Uncharacterized protein F44E2.6 OS=Caenorhabditis elegans GN=F44E2.6 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15 Identity = 45/98 (45.92%), Postives = 55/98 (56.12%), Query Frame = -2 Query: 186 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYE--GLPGAINRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 467 TG +N + G Y C CG+ L+ S KF +GCGWPAF E G I R D RTE+ C C HLGHVF +G K T ER+C+NSV + F Sbjct: 52 TGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPAFSESVGQDANIVRIVDRSHGMHRTEVRCKTCDAHLGHVF-NDGPKETTGERYCINSVCMAF 148
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_PASMU (Peptide methionine sulfoxide reductase msrB OS=Pasteurella multocida GN=msrB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15 Identity = 45/97 (46.39%), Postives = 55/97 (56.70%), Query Frame = -2 Query: 186 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 467 TG+ G Y C C + L+ S TKFD+GCGWP+F++ + P AI D RTEI C C HLGHVF E PT R+CVNSVS+ F Sbjct: 25 TGKLLDQQKKGLYRCVVCHSPLFVSDTKFDAGCGWPSFFQAISPEAIRYLDDYTLSRPRTEIRCGQCDAHLGHVF--EDGPPPTGLRYCVNSVSMAF 119
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_BURVG (Peptide methionine sulfoxide reductase msrB OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=msrB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = -2 Query: 186 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 467 TGEY G Y C C T L++S KF SGCGWP++++ L G I+ D R E+ C CG HLGHVF+ +G + T R+C+NS ++ F Sbjct: 41 TGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDRSHGMVRVEVRCNHCGAHLGHVFE-DGPRDQTGLRYCINSAALNF 136
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_BURCM (Peptide methionine sulfoxide reductase msrB OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=msrB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15 Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = -2 Query: 186 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI--NRSPDPDGR-RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 467 TGEY G Y C C T L++S KF SGCGWP++++ L G + + G R E+ C CG HLGHVF+ +G + T R+C+NS ++ F Sbjct: 41 TGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDRTHGMVRVEVRCNHCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_BURCH (Peptide methionine sulfoxide reductase msrB OS=Burkholderia cenocepacia (strain HI2424) GN=msrB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = -2 Query: 186 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 467 TGEY G Y C C T L++S KF SGCGWP++++ L G I+ D R E+ C CG HLGHVF+ +G + T R+C+NS ++ F Sbjct: 41 TGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKVDYSHGMVRVEVRCNNCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_BURCC (Peptide methionine sulfoxide reductase msrB OS=Burkholderia cenocepacia (strain MC0-3) GN=msrB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = -2 Query: 186 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 467 TGEY G Y C C T L++S KF SGCGWP++++ L G I+ D R E+ C CG HLGHVF+ +G + T R+C+NS ++ F Sbjct: 41 TGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKVDYSHGMVRVEVRCNHCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136 The following BLAST results are available for this feature:
BLAST of CX676018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676018 ID=CX676018; Name=CX676018; organism=Citrus sinensis; type=EST; length=825bpback to top |