FC921846
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921846 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.169e-13 Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 2 Query: 2 YWLSPVAWNLCGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 247 YW +PV+W L GL+T Q GDL+ + + DG T V F+ D++ F+ DF+ VV+ M + +F VFA AIK +NFQRR Sbjct: 1370 YWANPVSWTLYGLLTSQFGDLDQPLLLADGITTTTAV-DFLRDHFGFRHDFLGVVAGMVAGFCVLFAVVFALAIKYLNFQRR 1450
BLAST of FC921846 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.169e-13 Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 2 YWLSPVAWNLCGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 247 YWL PVAW L GL+ Q GD+ + D N M+VKQFI + Y +++ F+ VV+ M++++ +F +FA IK+ NFQ+R Sbjct: 1347 YWLCPVAWTLYGLIASQFGDITE--PMADSN---MSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423
BLAST of FC921846 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.374e-12 Identity = 29/82 (35.37%), Postives = 52/82 (63.41%), Query Frame = 2 Query: 2 YWLSPVAWNLCGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 247 YWL P+AW + GL+ Q GDLE ++ +P +N T+ ++ ++ + + F+PVV+ + +++ F F++A IK +NFQ R Sbjct: 1421 YWLCPLAWTVYGLIVTQYGDLEQIISVPGQSN--QTISYYVTHHFGYHRKFMPVVAPVLVLFAVFFAFMYAICIKKLNFQHR 1500
BLAST of FC921846 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.795e-12 Identity = 30/82 (36.59%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 2 YWLSPVAWNLCGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 247 YW+ PVAW + GL+ Q GD+E +++P G T+K +IE++Y + DF+ ++ + + + F F+FA+ I+ +NFQ+R Sbjct: 1336 YWICPVAWTVYGLIVSQYGDVEDTIKVP-GMANDPTIKWYIENHYGYDADFMIPIATVLVGFTLFFAFMFAFGIRTLNFQQR 1416
BLAST of FC921846 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.344e-12 Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 2 Query: 2 YWLSPVAWNLCGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 247 YW PVAW L GLV Q G+ + D TVK F+ F+ DF+PVV +M +V+ +F +FA++IK +NFQRR Sbjct: 1365 YWACPVAWTLYGLVVSQFGEYTDTMSDVDE-----TVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441
BLAST of FC921846 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.999e-12 Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 2 Query: 2 YWLSPVAWNLCGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 247 YWL PVAW + GL+ Q GD+E + +P + V+ FI+D + + DF+ VV+ + + F F +AY+I+ +NFQ+R Sbjct: 1430 YWLCPVAWTVYGLIVSQYGDVEDFITVP--GQSDQQVRPFIKDYFGYDPDFMGVVAAVLAGFTVFFAFTYAYSIRTLNFQQR 1509
BLAST of FC921846 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.774e-11 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 5 WLSPVAWNLCGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 247 W+ PVAW L GLV Q GD+ + + DG VK F+E+ +DFK ++ VV+++ + + +F F+F +AI +NFQ+R Sbjct: 1390 WICPVAWTLYGLVASQFGDI--MTPMDDGT----PVKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464 The following BLAST results are available for this feature:
BLAST of FC921846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921846 ID=FC921846; Name=FC921846; organism=Citrus sinensis; type=EST; length=328bpback to top |